RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TUBA1AQ71U36 451 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 NKAPQ8N5F7 415 aaKnown RBP17.76■□□□□ 0.43
SMPD4-202ENST00000409031 NAT8LQ8N9F0 302 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 NARS2Q96I59 477 aaKnown RBP17.76■□□□□ 0.43
SMPD4-202ENST00000409031 ARMC7Q9H6L4 198 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 MRPL39Q9NYK5 338 aaKnown RBP17.76■□□□□ 0.43
SMPD4-202ENST00000409031 PCDHB8Q9UN66 801 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 SSR3Q9UNL2 185 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 PCDHGA10Q9Y5H3 936 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 SF3B1O75533 1304 aaKnown RBP eCLIP17.76■□□□□ 0.432e-10■■■■■ 48.1
SMPD4-202ENST00000409031 CCDC162PA2VCL2 907 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 LRIG2O94898 1065 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 NFKB1P19838 968 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 CAP2P40123 477 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 AKR1D1P51857 326 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 ALDH6A1Q02252 535 aaKnown RBP17.76■□□□□ 0.43
SMPD4-202ENST00000409031 EIF3MQ7L2H7 374 aaKnown RBP17.76■□□□□ 0.43
SMPD4-202ENST00000409031 SLC47A1Q96FL8 570 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 BIRC8Q96P09 236 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 PKP2Q99959 881 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 AJAP1Q9UKB5 411 aaPredicted RBP17.76■□□□□ 0.43
SMPD4-202ENST00000409031 PMF1-BGLAPU3KQ54 211 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 DNAJA2O60884 412 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 CLPXO76031 633 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 IPO13O94829 963 aaKnown RBP17.75■□□□□ 0.43
SMPD4-202ENST00000409031 ITIH1P19827 911 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 KLRC2P26717 231 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 PIK3CGP48736 1102 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 SLC26A2P50443 739 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 ARHGEF7Q14155 803 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 FRMD7Q6ZUT3 714 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 SPATA19Q7Z5L4 167 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 PIK3C3Q8NEB9 887 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 SLC35B2Q8TB61 432 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 STARD8Q92502 1023 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 MAGEE1Q9HCI5 957 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 FAM240BA0A1B0GVZ2 78 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 TOR1BO14657 336 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 TBX1O43435 398 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 TSPAN8P19075 237 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 ELP6Q0PNE2 266 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 ZNF484Q5JVG2 852 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 OGFOD2Q6N063 350 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 WNT8BQ93098 351 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 MUC3BQ9H195 1237 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 IFT80Q9P2H3 777 aaPredicted RBP17.75■□□□□ 0.43
SMPD4-202ENST00000409031 A0A0J9YVX5 310 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 GNG14A0A1W2PPG7 69 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 TMEM63AO94886 807 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 ITGALP20701 1170 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 PTPN20Q4JDL3 420 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 CDC73Q6P1J9 531 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 OR5B17Q8NGF7 314 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 PORCNQ9H237 461 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 BTRCQ9Y297 605 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 AIREO43918 545 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 PRKD3O94806 890 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 LIPEQ05469 1076 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 C11orf74Q86VG3 221 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 CACTIN-AS1Q8N1I8 211 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 P2RY11Q96G91 374 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 ADGRE3Q9BY15 652 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 FAIMQ9NVQ4 179 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 ADGRE2Q9UHX3 823 aa17.75■□□□□ 0.43
SMPD4-202ENST00000409031 A0A1W2PPW3 197 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 ZNF99A8MXY4 864 aaPredicted RBP17.74■□□□□ 0.43
SMPD4-202ENST00000409031 BOLA2-SMG1P6H3BVE0 249 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 ERBB2P04626 1255 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 PABPC1P11940 636 aaKnown RBP17.74■□□□□ 0.43
SMPD4-202ENST00000409031 MZF1P28698 734 aaPredicted RBP17.74■□□□□ 0.43
SMPD4-202ENST00000409031 ABATP80404 500 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 CTBP1Q13363 440 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 IL18R1Q13478 541 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 LINC00116Q8NCU8 138 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 ERLEC1Q96DZ1 483 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 ALG2Q9H553 416 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 A0A1W2PQ72 361 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 FAM189A1O60320 539 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 DHFRP00374 187 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 STAT5AP42229 794 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 IL2P60568 153 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 ARMC8Q8IUR7 673 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 DCP1BQ8IZD4 617 aaKnown RBP17.74■□□□□ 0.43
SMPD4-202ENST00000409031 MCOLN3Q8TDD5 553 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 CPB2Q96IY4 423 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 HSFY1Q96LI6 401 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 CNTNAP4Q9C0A0 1308 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 RBM47A0AV96 593 aaKnown RBP17.74■□□□□ 0.43
SMPD4-202ENST00000409031 LYPLA2O95372 231 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 UNGP13051 313 aaPredicted RBP17.74■□□□□ 0.43
SMPD4-202ENST00000409031 LGALS3BPQ08380 585 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 MED22Q15528 200 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 GATA6Q92908 595 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 B3GALT6Q96L58 329 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 ZNF222Q9UK12 451 aa17.74■□□□□ 0.43
SMPD4-202ENST00000409031 PRG3Q9Y2Y8 225 aaPredicted RBP17.74■□□□□ 0.43
SMPD4-202ENST00000409031 TK2O00142 265 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 TIE1P35590 1138 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 HALP42357 657 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 ACLYP53396 1101 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms