RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 C6P13671 934 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 MMP12P39900 470 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 SSR1P43307 286 aaKnown RBP12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 HK3P52790 923 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 KIAA1024LP59773 190 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 INSM1Q01101 510 aaPredicted RBP12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 SEMG2Q02383 582 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 SPIDRQ14159 915 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 NR1I3Q14994 352 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 CLPPQ16740 277 aaPredicted RBP12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 ZFYVE27Q5T4F4 411 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 IGF2-ASQ6U949 168 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 SLC22A18ASQ8N1D0 253 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 PYROXD2Q8N2H3 581 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 TMEM74Q96NL1 305 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 UBL7Q96S82 380 aaPredicted RBP12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 LGMNQ99538 433 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 SYT11Q9BT88 431 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 WRAP53Q9BUR4 548 aaKnown RBP12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 DPH1Q9BZG8 443 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 POLR1BQ9H9Y6 1135 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 PDFQ9HBH1 243 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 PCDH12Q9NPG4 1184 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 LUC7LQ9NQ29 371 aaKnown RBP12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 PHPT1Q9NRX4 125 aaPredicted RBP12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 LHX3Q9UBR4 397 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 RAXQ9Y2V3 346 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 CPED1A4D0V7 1026 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 FAM149AA5PLN7 773 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 TK2O00142 265 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 TEX33O43247 280 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 CAPNS1P04632 268 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 H2AFZP0C0S5 128 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 TIMP2P16035 220 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 TSHRP16473 764 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 TNNT3P45378 269 aaPredicted RBP12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 LSSP48449 732 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 LIG3P49916 1009 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 SCNN1BP51168 640 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 FANCCQ00597 558 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 PDK2Q15119 407 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 CYTH1Q15438 398 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 TBC1D25Q3MII6 688 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 KDM7AQ6ZMT4 941 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 H2AFVQ71UI9 128 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 ZNF571Q7Z3V5 609 aaPredicted RBP12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 PDZD3Q86UT5 571 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 DCBLD2Q96PD2 775 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 SLC39A8Q9C0K1 460 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 POLR1EQ9GZS1 481 aaKnown RBP12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 NOL6Q9H6R4 1146 aaKnown RBP12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 WDR26Q9H7D7 661 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 ANAPC7Q9UJX3 599 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 CAPN11Q9UMQ6 739 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 PHTF1Q9UMS5 762 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 CA5BQ9Y2D0 317 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 DGKBQ9Y6T7 804 aa12.94□□□□□ -0.34
SNORD88B-201ENST00000408454 FAM170AA1A519 330 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 CPP00450 1065 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 PNLIPP16233 465 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 ZNF30P17039 623 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 IGFALSP35858 605 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 EIF2S3P41091 472 aaKnown RBP12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 EPHB1P54762 984 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 ADKP55263 362 aaKnown RBP12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 RPL26P61254 145 aaKnown RBP12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 ILF3Q12906 894 aaKnown RBP eCLIP12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 IRF4Q15306 451 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 ARMC12Q5T9G4 340 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 AFMIDQ63HM1 303 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 ALKBH5Q6P6C2 394 aaKnown RBP12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 ENPP7Q6UWV6 458 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 LEKR1Q6ZMV7 388 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 DPPA4Q7L190 304 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 BZW1Q7L1Q6 419 aaKnown RBP12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 EFL1Q7Z2Z2 1120 aaKnown RBP12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 HID1Q8IV36 788 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 AVL9Q8NBF6 648 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 TP53I13Q8NBR0 393 aaPredicted RBP12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 OR56A4Q8NGH8 313 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 WDR36Q8NI36 951 aaKnown RBP12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 HSPH1Q92598 858 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 ECHDC3Q96DC8 303 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 CELF6Q96J87 481 aaKnown RBP12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 EXOC2Q96KP1 924 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 NUDCD1Q96RS6 583 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 SRPK1Q96SB4 655 aaKnown RBP12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 DPYSL5Q9BPU6 564 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 APOOQ9BUR5 198 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 BOCQ9BWV1 1114 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 HSD3B7Q9H2F3 369 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 STN1Q9H668 368 aaKnown RBP12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 UCKL1Q9NWZ5 548 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 PADI4Q9UM07 663 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 RPL26L1Q9UNX3 145 aaKnown RBP12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 PCDHGA8Q9Y5G5 932 aa12.93□□□□□ -0.34
SNORD88B-201ENST00000408454 USP24Q9UPU5 2620 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 TP53BP1Q12888 1972 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms