RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 KYNUQ16719 465 aa20.6■□□□□ 0.89
CHKB-201ENST00000406938 SDE2Q6IQ49 451 aa20.6■□□□□ 0.89
CHKB-201ENST00000406938 GJD3Q8N144 294 aa20.6■□□□□ 0.89
CHKB-201ENST00000406938 TXNDC5Q8NBS9 432 aaKnown RBP20.6■□□□□ 0.89
CHKB-201ENST00000406938 RPLP0P6Q8NHW5 317 aa20.6■□□□□ 0.89
CHKB-201ENST00000406938 UBLCP1Q8WVY7 318 aaPredicted RBP20.6■□□□□ 0.89
CHKB-201ENST00000406938 SMIM14Q96QK8 99 aa20.6■□□□□ 0.89
CHKB-201ENST00000406938 FAM129BQ96TA1 746 aa20.6■□□□□ 0.89
CHKB-201ENST00000406938 CD320Q9NPF0 282 aa20.6■□□□□ 0.89
CHKB-201ENST00000406938 ZC3H7BQ9UGR2 993 aaKnown RBP20.6■□□□□ 0.89
CHKB-201ENST00000406938 MUTYHQ9UIF7 546 aa20.6■□□□□ 0.89
CHKB-201ENST00000406938 SARDHQ9UL12 918 aa20.6■□□□□ 0.89
CHKB-201ENST00000406938 SYNCRIPO60506 623 aaKnown RBP20.59■□□□□ 0.89
CHKB-201ENST00000406938 ACSL3O95573 720 aa20.59■□□□□ 0.89
CHKB-201ENST00000406938 HSD17B3P37058 310 aa20.59■□□□□ 0.89
CHKB-201ENST00000406938 CAMK2GQ13555 558 aaPredicted RBP20.59■□□□□ 0.89
CHKB-201ENST00000406938 SEPT6Q14141 434 aa20.59■□□□□ 0.89
CHKB-201ENST00000406938 POM121L1PQ3SYA9 428 aa20.59■□□□□ 0.89
CHKB-201ENST00000406938 CAPN12Q6ZSI9 719 aa20.59■□□□□ 0.89
CHKB-201ENST00000406938 SIX5Q8N196 739 aa20.59■□□□□ 0.89
CHKB-201ENST00000406938 BLOC1S5Q8TDH9 187 aa20.59■□□□□ 0.89
CHKB-201ENST00000406938 SPOCK2Q92563 424 aa20.59■□□□□ 0.89
CHKB-201ENST00000406938 CFAP36Q96G28 342 aa20.59■□□□□ 0.89
CHKB-201ENST00000406938 TTC25Q96NG3 672 aa20.59■□□□□ 0.89
CHKB-201ENST00000406938 EPB41L4BQ9H329 900 aa20.59■□□□□ 0.89
CHKB-201ENST00000406938 PABPC3Q9H361 631 aaKnown RBP20.59■□□□□ 0.89
CHKB-201ENST00000406938 PPM1HQ9ULR3 514 aa20.59■□□□□ 0.89
CHKB-201ENST00000406938 RIPK2O43353 540 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 TTC4O95801 387 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 HOXB2P14652 356 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 CTPS1P17812 591 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 PGAM1P18669 254 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 TARSP26639 723 aaKnown RBP20.58■□□□□ 0.89
CHKB-201ENST00000406938 ZNF805Q5CZA5 627 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 PCID2Q5JVF3 399 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 KIAA1211LQ6NV74 962 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 BRAT1Q6PJG6 821 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 DSG4Q86SJ6 1040 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 ZNF687Q8N1G0 1237 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 TMIEQ8NEW7 156 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 PPHLN1Q8NEY8 458 aaKnown RBP20.58■□□□□ 0.89
CHKB-201ENST00000406938 PIP4K2CQ8TBX8 421 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 SHDQ96IW2 340 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 PLAC1Q9HBJ0 212 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 LRRC4CQ9HCJ2 640 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 SOX13Q9UN79 622 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 TCAF1Q9Y4C2 921 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 SPO11Q9Y5K1 396 aa20.58■□□□□ 0.89
CHKB-201ENST00000406938 MYLKQ15746 1914 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 A0A0J9YYE9 177 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 A0A1W2PQ67 120 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 TSPAN11A1L157 253 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 KPNA3O00505 521 aaPredicted RBP20.57■□□□□ 0.88
CHKB-201ENST00000406938 IL1BP01584 269 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 TRBC1P01850 177 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 ALPIP09923 528 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 CHRNB1P11230 501 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 METAP1P53582 386 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 STARD6P59095 220 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 GPX6P59796 221 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 STARD3Q14849 445 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 PTPRRQ15256 657 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 UNC5AQ6ZN44 842 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 MMAAQ8IVH4 418 aaKnown RBP20.57■□□□□ 0.88
CHKB-201ENST00000406938 PALM2Q8IXS6 379 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 NAT9Q9BTE0 207 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 LTB4R2Q9NPC1 389 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 CHRAC1Q9NRG0 131 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 MRPS17Q9Y2R5 130 aaKnown RBP20.57■□□□□ 0.88
CHKB-201ENST00000406938 CKAP5Q14008 2032 aa20.57■□□□□ 0.88
CHKB-201ENST00000406938 A0A1W2PQF6 199 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 CCDC78A2IDD5 438 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 HEATR9A2RTY3 570 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 CAPN8A6NHC0 703 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 SSTR1P30872 391 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 PSMD8P48556 350 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 UBXN2BQ14CS0 331 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 LRRC73Q5JTD7 316 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 SPDYCQ5MJ68 293 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 Q6ZS52 159 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 PARS2Q7L3T8 475 aaKnown RBP20.56■□□□□ 0.88
CHKB-201ENST00000406938 CCNJLQ8IV13 435 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 PTCD2Q8WV60 388 aaKnown RBP20.56■□□□□ 0.88
CHKB-201ENST00000406938 RANBP9Q96S59 729 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 KIFC1Q9BW19 673 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 RSPH9Q9H1X1 276 aaPredicted RBP20.56■□□□□ 0.88
CHKB-201ENST00000406938 VPS37BQ9H9H4 285 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.56■□□□□ 0.88
CHKB-201ENST00000406938 DKK3Q9UBP4 350 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 PHTF1Q9UMS5 762 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 MTF2Q9Y483 593 aaPredicted RBP20.56■□□□□ 0.88
CHKB-201ENST00000406938 TRIOO75962 3097 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 FAM237BA0A1B0GVD1 139 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 KANSL1LA0AUZ9 987 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 MAGEB16A2A368 324 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 C16orf96A6NNT2 1141 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 C1QTNF3-AMACRE9PGA6 284 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 COL9A1P20849 921 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 ADRA1DP25100 572 aa20.56■□□□□ 0.88
CHKB-201ENST00000406938 ITGB7P26010 798 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms