RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CILP2Q8IUL8 1156 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 TEX26Q8N6G2 289 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 ARRDC2Q8TBH0 407 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 SPATS2LQ9NUQ6 558 aaKnown RBP9.91□□□□□ -0.82
MSH2-202ENST00000406134 TLK1Q9UKI8 766 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 RNF11Q9Y3C5 154 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 OBSL1O75147 1896 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 OR51F1A6NGY5 319 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 LDB2O43679 373 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 CNTN5O94779 1100 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 OR4Q2P0C623 313 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 ENO3P13929 434 aaPredicted RBP9.91□□□□□ -0.82
MSH2-202ENST00000406134 CYP2C18P33260 490 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 CD151P48509 253 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 WNT3AP56704 352 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 USP46P62068 366 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 POU4F1Q01851 419 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 FLOT2Q14254 428 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 ZRSR2Q15696 482 aaKnown RBP9.91□□□□□ -0.82
MSH2-202ENST00000406134 REP15Q6BDI9 236 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 RETREG3Q86VR2 466 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 PPHLN1Q8NEY8 458 aaKnown RBP9.91□□□□□ -0.82
MSH2-202ENST00000406134 OR9I1Q8NGQ6 314 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 NAT14Q8WUY8 206 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 ATP6V1E2Q96A05 226 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 SCYL1Q96KG9 808 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 RBM22Q9NW64 420 aaKnown RBP eCLIP9.91□□□□□ -0.823e-6■■■■□ 26.3
MSH2-202ENST00000406134 IKZF3Q9UKT9 509 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 MED16Q9Y2X0 877 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 KCTD3Q9Y597 815 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 A0A1W2PQH9 124 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 ANKRD33BA6NCL7 494 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 SLCO1B7G3V0H7 640 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 DLGAP1O14490 977 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 MUSKO15146 869 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 FGF10O15520 208 aaPredicted RBP9.9□□□□□ -0.82
MSH2-202ENST00000406134 PGM3O95394 542 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 YWHAQP27348 245 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 PMLP29590 882 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 ZFP36L2P47974 494 aaKnown RBP9.9□□□□□ -0.82
MSH2-202ENST00000406134 MAXP61244 160 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 SLC10A7Q0GE19 358 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 LSAMPQ13449 338 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 CSHL1Q14406 222 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 PRPSAP1Q14558 356 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 MMEL1Q495T6 779 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 C6orf52Q5T4I8 152 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 ISCA2Q86U28 154 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 CHERPQ8IWX8 916 aaKnown RBP9.9□□□□□ -0.82
MSH2-202ENST00000406134 FATE1Q969F0 183 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 ASB9Q96DX5 294 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 HMCESQ96FZ2 354 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 DUS3LQ96G46 650 aaKnown RBP9.9□□□□□ -0.82
MSH2-202ENST00000406134 SLC45A3Q96JT2 553 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 UHRF1Q96T88 793 aaPredicted RBP9.9□□□□□ -0.82
MSH2-202ENST00000406134 CYP4F12Q9HCS2 524 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 ENTPD7Q9NQZ7 604 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 PTGDR2Q9Y5Y4 395 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 IGLV3-10A0A075B6K4 115 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 TCRBV3S1A0A5B6 114 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 KLHL33A6NCF5 533 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 PSMD3O43242 534 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 ANXA9O76027 345 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 S1PR4O95977 384 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 ODC1P11926 461 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 ATP5F1P24539 256 aaPredicted RBP9.9□□□□□ -0.82
MSH2-202ENST00000406134 PCSK1P29120 753 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 CAP1Q01518 475 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 TAF2Q6P1X5 1199 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 PIWIL4Q7Z3Z4 852 aaKnown RBP9.9□□□□□ -0.82
MSH2-202ENST00000406134 CUZD1Q86UP6 607 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 KLHDC9Q8NEP7 349 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 SYT17Q9BSW7 474 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 FBRSL1Q9HCM7 1045 aaKnown RBP9.9□□□□□ -0.82
MSH2-202ENST00000406134 CHST12Q9NRB3 414 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 UTP6Q9NYH9 597 aaKnown RBP9.9□□□□□ -0.82
MSH2-202ENST00000406134 TMEM181Q9P2C4 612 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 SUCOQ9UBS9 1254 aaKnown RBP9.9□□□□□ -0.82
MSH2-202ENST00000406134 MID2Q9UJV3 735 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 RAB26Q9ULW5 256 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 AP4B1Q9Y6B7 739 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 ANKRD12Q6UB98 2062 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 CASP8AP2Q9UKL3 1982 aa9.9□□□□□ -0.82
MSH2-202ENST00000406134 AP3B1O00203 1094 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 ZNF623O75123 536 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 MTHFD2P13995 350 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 ME2P23368 584 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 PLK1P53350 603 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 GEMP55040 296 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 ACVR1Q04771 509 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 RALGDSQ12967 914 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 MGAT5BQ3V5L5 792 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 CLEC6AQ6EIG7 209 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 NEPROQ6NW34 567 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 ZNF598Q86UK7 904 aaKnown RBP9.9□□□□□ -0.83
MSH2-202ENST00000406134 UMODL1-AS1Q8N2C9 162 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 PCDH20Q8N6Y1 951 aaKnown RBP9.9□□□□□ -0.83
MSH2-202ENST00000406134 CCNYL1Q8N7R7 359 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 L3HYPDHQ96EM0 354 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 KLHL5Q96PQ7 755 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms