RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 TRAF2Q12933 501 aa14.16□□□□□ -0.14
PRAME-205ENST00000405655 STX3Q13277 289 aa14.16□□□□□ -0.14
PRAME-205ENST00000405655 TAF1BQ53T94 588 aaPredicted RBP14.16□□□□□ -0.14
PRAME-205ENST00000405655 EFHBQ8N7U6 833 aa14.16□□□□□ -0.14
PRAME-205ENST00000405655 C2CD4AQ8NCU7 369 aaPredicted RBP14.16□□□□□ -0.14
PRAME-205ENST00000405655 LPCAT1Q8NF37 534 aa14.16□□□□□ -0.14
PRAME-205ENST00000405655 ING5Q8WYH8 240 aa14.16□□□□□ -0.14
PRAME-205ENST00000405655 CLP1Q92989 425 aaKnown RBP14.16□□□□□ -0.14
PRAME-205ENST00000405655 ZSWIM3Q96MP5 696 aa14.16□□□□□ -0.14
PRAME-205ENST00000405655 TASP1Q9H6P5 420 aa14.16□□□□□ -0.14
PRAME-205ENST00000405655 SCUBE2Q9NQ36 999 aa14.16□□□□□ -0.14
PRAME-205ENST00000405655 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.16□□□□□ -0.14
PRAME-205ENST00000405655 HSFX1Q9UBD0 423 aa14.16□□□□□ -0.14
PRAME-205ENST00000405655 COPG2Q9UBF2 871 aa14.16□□□□□ -0.14
PRAME-205ENST00000405655 DCDC2Q9UHG0 476 aa14.16□□□□□ -0.14
PRAME-205ENST00000405655 VPS51Q9UID3 782 aa14.16□□□□□ -0.14
PRAME-205ENST00000405655 CDH22Q9UJ99 828 aa14.16□□□□□ -0.14
PRAME-205ENST00000405655 ATXN2Q99700 1313 aaKnown RBP14.15□□□□□ -0.14
PRAME-205ENST00000405655 NEMP2A6NFY4 417 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 BNIP3LO60238 219 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 GOT2P00505 430 aaKnown RBP14.15□□□□□ -0.14
PRAME-205ENST00000405655 T-ENOLP0DO92 83 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 CTPS1P17812 591 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 CR2P20023 1033 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 PPM1AP35813 382 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 MAGEA9P43362 315 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 STK19P49842 368 aaPredicted RBP14.15□□□□□ -0.14
PRAME-205ENST00000405655 CDKN2DP55273 166 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 C1QTNF8P60827 252 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 TEAD2Q15562 447 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 KIAA0930Q6ICG6 404 aaPredicted RBP14.15□□□□□ -0.14
PRAME-205ENST00000405655 PACS2Q86VP3 889 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 CMTM8Q8IZV2 173 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 TDRD5Q8NAT2 981 aaKnown RBP14.15□□□□□ -0.14
PRAME-205ENST00000405655 PPP1R14CQ8TAE6 165 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 SPPL3Q8TCT6 385 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 ALG14Q96F25 216 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 CCDC97Q96F63 343 aaPredicted RBP14.15□□□□□ -0.14
PRAME-205ENST00000405655 PPP1R36Q96LQ0 422 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 PSKH2Q96QS6 385 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 TNKS2Q9H2K2 1166 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 SEPT3Q9UH03 358 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 INSL6Q9Y581 213 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 OR51B4Q9Y5P0 310 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 RAI2Q9Y5P3 530 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 USH1CQ9Y6N9 552 aa14.15□□□□□ -0.14
PRAME-205ENST00000405655 A8MUI8 341 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 LEFTY2O00292 366 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 SNNO75324 88 aaPredicted RBP14.15□□□□□ -0.15
PRAME-205ENST00000405655 FSBPO95073 299 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 OLFM2O95897 454 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 SERPINF2P08697 491 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 CPA3P15088 417 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 SLC1A6P48664 564 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 CSRP3P50461 194 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 CSE1LP55060 971 aaKnown RBP14.15□□□□□ -0.15
PRAME-205ENST00000405655 BNIP1Q12981 228 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 ASTLQ6HA08 431 aaPredicted RBP14.15□□□□□ -0.15
PRAME-205ENST00000405655 TMEM207Q6UWW9 146 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 KYAT3Q6YP21 454 aaKnown RBP14.15□□□□□ -0.15
PRAME-205ENST00000405655 MAVSQ7Z434 540 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 UBE2Q1Q7Z7E8 422 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 CNTN4Q8IWV2 1026 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 SHKBP1Q8TBC3 707 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 ACMSDQ8TDX5 336 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 ANKRD49Q8WVL7 239 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 MRPS31Q92665 395 aaKnown RBP14.15□□□□□ -0.15
PRAME-205ENST00000405655 FATE1Q969F0 183 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 ISL2Q96A47 359 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 GRAMD1AQ96CP6 724 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 SCYL1Q96KG9 808 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 SORT1Q99523 831 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 TRIM55Q9BYV6 548 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 LINC00597Q9H2U6 94 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 LHX3Q9UBR4 397 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 DNAJC16Q9Y2G8 782 aa14.15□□□□□ -0.15
PRAME-205ENST00000405655 GFRA2O00451 464 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 MOSPD3O75425 235 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 ZNF189O75820 626 aaPredicted RBP14.14□□□□□ -0.15
PRAME-205ENST00000405655 LUC7L3O95232 432 aaKnown RBP14.14□□□□□ -0.15
PRAME-205ENST00000405655 PIGNO95427 931 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 CHRNGP07510 517 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 ALPIP09923 528 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 CD1EP15812 388 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 CA5AP35218 305 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 ARFIP2P53365 341 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 AQP5P55064 265 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 TNK2Q07912 1038 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 USP4Q13107 963 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 CDH18Q13634 790 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 FRG1Q14331 258 aaKnown RBP14.14□□□□□ -0.15
PRAME-205ENST00000405655 FYB2Q5VWT5 728 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 ITIH5Q86UX2 942 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 MFN1Q8IWA4 741 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 C12orf76Q8N812 135 aaPredicted RBP14.14□□□□□ -0.15
PRAME-205ENST00000405655 OR4K2Q8NGD2 314 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 GPR78Q96P69 363 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 LRRC37BQ96QE4 947 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 NMRAL1Q9HBL8 299 aa14.14□□□□□ -0.15
PRAME-205ENST00000405655 MAN1C1Q9NR34 630 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms