RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PQBP1O60828 265 aaKnown RBP19.97■□□□□ 0.79
CCDC47-202ENST00000403162 FAM163BP0C2L3 166 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 ZNF23P17027 643 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 CDH2P19022 906 aaPredicted RBP19.97■□□□□ 0.79
CCDC47-202ENST00000403162 ARNTP27540 789 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 SLC5A2P31639 672 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 RANBP1P43487 201 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 COG7P83436 770 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 SULT2A1Q06520 285 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 CTBP1Q13363 440 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 PDAP1Q13442 181 aaKnown RBP19.97■□□□□ 0.79
CCDC47-202ENST00000403162 IKBKEQ14164 716 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 CNSTQ6PJW8 725 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 PAOXQ6QHF9 649 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 OTOP3Q7RTS5 596 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 CARM1Q86X55 608 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 SPPL2BQ8TCT7 592 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 PTCD2Q8WV60 388 aaKnown RBP19.97■□□□□ 0.79
CCDC47-202ENST00000403162 UHRF1Q96T88 793 aaPredicted RBP19.97■□□□□ 0.79
CCDC47-202ENST00000403162 TMEM106CQ9BVX2 250 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 FTHL17Q9BXU8 183 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 COQ10BQ9H8M1 238 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 MEAF6Q9HAF1 191 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 DDX18Q9NVP1 670 aaKnown RBP19.97■□□□□ 0.79
CCDC47-202ENST00000403162 OR12D3Q9UGF7 316 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 TCRBV3S1A0A5B6 114 aa19.96■□□□□ 0.79
CCDC47-202ENST00000403162 HEATR9A2RTY3 570 aa19.96■□□□□ 0.79
CCDC47-202ENST00000403162 GABRDO14764 452 aa19.96■□□□□ 0.79
CCDC47-202ENST00000403162 F9P00740 461 aa19.96■□□□□ 0.79
CCDC47-202ENST00000403162 CKBP12277 381 aa19.96■□□□□ 0.79
CCDC47-202ENST00000403162 NCAM1P13591 858 aa19.96■□□□□ 0.79
CCDC47-202ENST00000403162 REP15Q6BDI9 236 aa19.96■□□□□ 0.79
CCDC47-202ENST00000403162 PCDH20Q8N6Y1 951 aaKnown RBP19.96■□□□□ 0.79
CCDC47-202ENST00000403162 TSPAN14Q8NG11 270 aa19.96■□□□□ 0.79
CCDC47-202ENST00000403162 MCOLN1Q9GZU1 580 aa19.96■□□□□ 0.79
CCDC47-202ENST00000403162 OSBPL2Q9H1P3 480 aa19.96■□□□□ 0.79
CCDC47-202ENST00000403162 GTSE1Q9NYZ3 720 aa19.96■□□□□ 0.79
CCDC47-202ENST00000403162 ARHGEF37A1IGU5 675 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 LRIG2O94898 1065 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 NRF1Q16656 503 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 RAB41Q5JT25 222 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 IRAK1BP1Q5VVH5 260 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 PM20D1Q6GTS8 502 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 SLC39A5Q6ZMH5 540 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 AFAP1L2Q8N4X5 818 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 PPHLN1Q8NEY8 458 aaKnown RBP19.95■□□□□ 0.78
CCDC47-202ENST00000403162 HEXDCQ8WVB3 486 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 RNF39Q9H2S5 420 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 TRPC7Q9HCX4 862 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 IPO11Q9UI26 975 aaKnown RBP19.95■□□□□ 0.78
CCDC47-202ENST00000403162 ST3GAL5Q9UNP4 418 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 AK5Q9Y6K8 562 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 MYLKQ15746 1914 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 TANC1Q9C0D5 1861 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 FBP2O00757 339 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 TRMUO75648 421 aaKnown RBP19.95■□□□□ 0.78
CCDC47-202ENST00000403162 CDK4P11802 303 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 PCSK6P29122 969 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 SLC7A1P30825 629 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 SLC1A2P43004 574 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 CD151P48509 253 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 CXCR3P49682 368 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 TAS2R39P59534 338 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 POU6F1Q14863 301 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 FAM26DQ5JW98 314 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 KIAA0319Q5VV43 1072 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 WSCD1Q658N2 575 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 DENND5AQ6IQ26 1287 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 SPATA6LQ8N4H0 392 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 C2CD4AQ8NCU7 369 aaPredicted RBP19.95■□□□□ 0.78
CCDC47-202ENST00000403162 LRTOMTQ8WZ04 291 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 LPGAT1Q92604 370 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 ELMO2Q96JJ3 720 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 PCDHAC1Q9H158 963 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 WDCPQ9H6R7 721 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 PREBQ9HCU5 417 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 SPAG4Q9NPE6 437 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 CD300AQ9UGN4 299 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 TCAF1Q9Y4C2 921 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 SNX10Q9Y5X0 201 aa19.95■□□□□ 0.78
CCDC47-202ENST00000403162 H3BSA7 217 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 PSMD12O00232 456 aaPredicted RBP19.94■□□□□ 0.78
CCDC47-202ENST00000403162 HNRNPRO43390 633 aaKnown RBP19.94■□□□□ 0.78
CCDC47-202ENST00000403162 H6PDO95479 791 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 PYGLP06737 847 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 ALDH3B2P48448 385 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 POU4F1Q01851 419 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 FASTKQ14296 549 aaKnown RBP19.94■□□□□ 0.78
CCDC47-202ENST00000403162 ESRP1Q6NXG1 681 aaKnown RBP19.94■□□□□ 0.78
CCDC47-202ENST00000403162 DCLRE1AQ6PJP8 1040 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 POTEHQ6S545 545 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 SPATA22Q8NHS9 363 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 LZICQ8WZA0 190 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 SLCO4A1Q96BD0 722 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 CCDC126Q96EE4 140 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 CELF6Q96J87 481 aaKnown RBP19.94■□□□□ 0.78
CCDC47-202ENST00000403162 FCRL5Q96RD9 977 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 SMOQ99835 787 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 IGSF5Q9NSI5 407 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 UBDO15205 165 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms