RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 GALNT3Q14435 633 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 PRPSAP1Q14558 356 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 PPP1R7Q15435 360 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 KBTBD6Q86V97 674 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 LONP2Q86WA8 852 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 LRRN4CLQ8ND94 238 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 OR14C36Q8NHC7 312 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 TOE1Q96GM8 510 aaKnown RBP16.04■□□□□ 0.16
HMGA1-204ENST00000401473 HINFPQ9BQA5 517 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 APOL2Q9BQE5 337 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 TRIM51Q9BSJ1 452 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 FAM126AQ9BYI3 521 aaPredicted RBP16.04■□□□□ 0.16
HMGA1-204ENST00000401473 MBD1Q9UIS9 605 aaPredicted RBP16.04■□□□□ 0.16
HMGA1-204ENST00000401473 FZD4Q9ULV1 537 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 ITM2BQ9Y287 266 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 ARIH1Q9Y4X5 557 aaPredicted RBP16.04■□□□□ 0.16
HMGA1-204ENST00000401473 THADAQ6YHU6 1953 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 A8MX80 341 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 RIOK3O14730 519 aaKnown RBP16.03■□□□□ 0.16
HMGA1-204ENST00000401473 AREL1O15033 823 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 HRO43593 1189 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 AP2A1O95782 977 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 EPOP01588 193 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 APRTP07741 180 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 ALPIP09923 528 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 ATXN1LP0C7T5 689 aaKnown RBP16.03■□□□□ 0.16
HMGA1-204ENST00000401473 CTPS1P17812 591 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 FDFT1P37268 417 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 ADPRHP54922 357 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 POLR2LP62875 67 aaKnown RBP16.03■□□□□ 0.16
HMGA1-204ENST00000401473 PTK6Q13882 451 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 DHX34Q14147 1143 aaKnown RBP16.03■□□□□ 0.16
HMGA1-204ENST00000401473 SLC1A5Q15758 541 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 CFAP58Q5T655 872 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 DENND5AQ6IQ26 1287 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 C4orf22Q6V702 233 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 WDR5BQ86VZ2 330 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 SCRN2Q96FV2 425 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 RUNDC3BQ96NL0 473 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 LRRC1Q9BTT6 524 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 PCDH12Q9NPG4 1184 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 ZSCAN32Q9NX65 697 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 PHTF1Q9UMS5 762 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 NCKAP1Q9Y2A7 1128 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 FADS3Q9Y5Q0 445 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 FANCMQ8IYD8 2048 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.03■□□□□ 0.16
HMGA1-204ENST00000401473 A0A0J9YYE9 177 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 CTAGE15A4D2H0 777 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 UPK3BL1B0FP48 263 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 UPK3BL2E5RIL1 263 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 TRBC1P01850 177 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 CTAGE8P0CG41 777 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 BASP1P80723 227 aaKnown RBP16.03■□□□□ 0.16
HMGA1-204ENST00000401473 QPCTQ16769 361 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 USP39Q53GS9 565 aaKnown RBP16.03■□□□□ 0.16
HMGA1-204ENST00000401473 SIRPB2Q5JXA9 342 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 CTAGE6Q86UF2 777 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 CTAGE4Q8IX94 777 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 MNS1Q8NEH6 495 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 LPCAT1Q8NF37 534 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 RMDN1Q96DB5 314 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 IFT43Q96FT9 208 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 FEM1CQ96JP0 617 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 PRRX2Q99811 253 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 FICDQ9BVA6 458 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 BTBD1Q9H0C5 482 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 R4GN57 208 aa16.03■□□□□ 0.16
HMGA1-204ENST00000401473 FAM47DPA6NHR8 397 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 TP73O15350 636 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 PLRG1O43660 514 aaKnown RBP16.02■□□□□ 0.16
HMGA1-204ENST00000401473 NDST3O95803 873 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 CPP00450 1065 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 PIRTP0C851 137 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 BCKDHBP21953 392 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 CD6P30203 668 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 HNF1BP35680 557 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 ADCY8P40145 1251 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 MSLNQ13421 630 aaPredicted RBP16.02■□□□□ 0.16
HMGA1-204ENST00000401473 ANKRD22Q5VYY1 191 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 MAATS1Q7Z4T9 603 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 MMGT1Q8N4V1 131 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 SLC25A41Q8N5S1 370 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 PAF1Q8N7H5 531 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 CEP112Q8N8E3 955 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 CPT1BQ92523 772 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 FSD1LQ9BXM9 530 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 ADGRE3Q9BY15 652 aa16.02■□□□□ 0.16
HMGA1-204ENST00000401473 PIH1D1Q9NWS0 290 aaKnown RBP16.02■□□□□ 0.16
HMGA1-204ENST00000401473 ZFHX2Q9C0A1 2572 aaPredicted RBP16.02■□□□□ 0.15
HMGA1-204ENST00000401473 A0A1W2PQ67 120 aa16.01■□□□□ 0.15
HMGA1-204ENST00000401473 NPIPB15A6NHN6 443 aaPredicted RBP16.01■□□□□ 0.15
HMGA1-204ENST00000401473 C10orf142B7Z368 130 aa16.01■□□□□ 0.15
HMGA1-204ENST00000401473 LILRB5O75023 590 aa16.01■□□□□ 0.15
HMGA1-204ENST00000401473 CA4P22748 312 aa16.01■□□□□ 0.15
HMGA1-204ENST00000401473 EPHB1P54762 984 aa16.01■□□□□ 0.15
HMGA1-204ENST00000401473 RPL26P61254 145 aaKnown RBP16.01■□□□□ 0.15
HMGA1-204ENST00000401473 FAM193AP78312 1265 aa16.01■□□□□ 0.15
HMGA1-204ENST00000401473 SLC7A5Q01650 507 aa16.01■□□□□ 0.15
HMGA1-204ENST00000401473 KCNJ11Q14654 390 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms