RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 PELI3Q8N2H9 469 aa19.65■□□□□ 0.74
COL13A1-205ENST00000398978 SLCO4A1Q96BD0 722 aa19.65■□□□□ 0.74
COL13A1-205ENST00000398978 IL12RB2Q99665 862 aa19.65■□□□□ 0.74
COL13A1-205ENST00000398978 MARCH4Q9P2E8 410 aaPredicted RBP19.65■□□□□ 0.74
COL13A1-205ENST00000398978 TRPC5OSA6NMA1 111 aa19.65■□□□□ 0.74
COL13A1-205ENST00000398978 SIX3O95343 332 aaPredicted RBP19.65■□□□□ 0.74
COL13A1-205ENST00000398978 ZNF26P17031 533 aaPredicted RBP19.65■□□□□ 0.74
COL13A1-205ENST00000398978 CDKN2DP55273 166 aa19.65■□□□□ 0.74
COL13A1-205ENST00000398978 TRIM25Q14258 630 aaKnown RBP19.65■□□□□ 0.74
COL13A1-205ENST00000398978 PIWIL4Q7Z3Z4 852 aaKnown RBP19.65■□□□□ 0.74
COL13A1-205ENST00000398978 SCN4BQ8IWT1 228 aa19.65■□□□□ 0.74
COL13A1-205ENST00000398978 DGCR14Q96DF8 476 aaKnown RBP19.65■□□□□ 0.74
COL13A1-205ENST00000398978 MAELQ96JY0 434 aaKnown RBP19.65■□□□□ 0.74
COL13A1-205ENST00000398978 NMUR1Q9HB89 426 aa19.65■□□□□ 0.74
COL13A1-205ENST00000398978 IPO13O94829 963 aaKnown RBP19.64■□□□□ 0.73
COL13A1-205ENST00000398978 INHBCP55103 352 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 DSC2Q02487 901 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 HERC6Q8IVU3 1022 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 HIC2Q96JB3 615 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.64■□□□□ 0.73
COL13A1-205ENST00000398978 IPO11Q9UI26 975 aaKnown RBP19.64■□□□□ 0.73
COL13A1-205ENST00000398978 RNF11Q9Y3C5 154 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 SMIM31A0A1B0GVY4 71 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 FAM149AA5PLN7 773 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 IRAK2O43187 625 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 NPHS1O60500 1241 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 COL6A2P12110 1019 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 SLC7A2P52569 658 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 GEMP55040 296 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 GEN1Q17RS7 908 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 RANBP10Q6VN20 620 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 GPR152Q8TDT2 470 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 TSGA13Q96PP4 275 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 CAAP1Q9H8G2 361 aa19.64■□□□□ 0.73
COL13A1-205ENST00000398978 MRASO14807 208 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 CACNG3O60359 315 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 CHRM3P20309 590 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 CDH15P55291 814 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 SLC10A7Q0GE19 358 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 LRP8Q14114 963 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 CYHR1Q6ZMK1 362 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 KCNA7Q96RP8 456 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 EGFL7Q9UHF1 273 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 VPS28Q9UK41 221 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 NYNRINQ9P2P1 1898 aaKnown RBP19.63■□□□□ 0.73
COL13A1-205ENST00000398978 AP1G1O43747 822 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 TNFAIP8O95379 198 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 PRSS56P0CW18 603 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 GRIK1P39086 918 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 PRAMEP78395 509 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 HERC3Q15034 1050 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 HECTD2Q5U5R9 776 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 HDAC10Q969S8 669 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 EPS15L1Q9UBC2 864 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 PTCH2Q9Y6C5 1203 aa19.63■□□□□ 0.73
COL13A1-205ENST00000398978 HAPLN1P10915 354 aaPredicted RBP19.62■□□□□ 0.73
COL13A1-205ENST00000398978 SLC5A3P53794 718 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 POTEHQ6S545 545 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 CIR1Q86X95 450 aaPredicted RBP19.62■□□□□ 0.73
COL13A1-205ENST00000398978 B4GALNT2Q8NHY0 566 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 ASB9Q96DX5 294 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 SENP6Q9GZR1 1112 aaPredicted RBP19.62■□□□□ 0.73
COL13A1-205ENST00000398978 AGO3Q9H9G7 860 aaKnown RBP19.62■□□□□ 0.73
COL13A1-205ENST00000398978 TRAF6Q9Y4K3 522 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 HS3ST4Q9Y661 456 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 SAC3D1A6NKF1 404 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 E9PAM4 449 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 CNTN5O94779 1100 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 LTA4HP09960 611 aaKnown RBP19.62■□□□□ 0.73
COL13A1-205ENST00000398978 PSMC3P17980 439 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 PAMP19021 973 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 GPR15P49685 360 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 PRKAA2P54646 552 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 CAPRIN1Q14444 709 aaKnown RBP19.62■□□□□ 0.73
COL13A1-205ENST00000398978 PCBP1Q15365 356 aaKnown RBP eCLIP19.62■□□□□ 0.73
COL13A1-205ENST00000398978 UPP1Q16831 310 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 HMBOX1Q6NT76 420 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 ARHGAP22Q7Z5H3 698 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 TMEM86AQ8N2M4 240 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 ENTPD7Q9NQZ7 604 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 OSER1Q9NX31 292 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 LAMA3Q16787 3333 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 HEATR9A2RTY3 570 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 PCSK1P29120 753 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 GRIA3P42263 894 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 FOXA1P55317 472 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 POU4F1Q01851 419 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 KIF19Q2TAC6 998 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 TTC16Q8NEE8 873 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 OR13J1Q8NGT2 312 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 NSUN5Q96P11 429 aaKnown RBP19.62■□□□□ 0.73
COL13A1-205ENST00000398978 TMEM79Q9BSE2 394 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 AURKCQ9UQB9 309 aa19.62■□□□□ 0.73
COL13A1-205ENST00000398978 A0A087X1B8 175 aa19.61■□□□□ 0.73
COL13A1-205ENST00000398978 NR5A2O00482 541 aa19.61■□□□□ 0.73
COL13A1-205ENST00000398978 HNRNPRO43390 633 aaKnown RBP19.61■□□□□ 0.73
COL13A1-205ENST00000398978 ALDOCP09972 364 aaKnown RBP19.61■□□□□ 0.73
COL13A1-205ENST00000398978 ZNF865P0CJ78 1059 aaPredicted RBP19.61■□□□□ 0.73
COL13A1-205ENST00000398978 PFKPQ01813 784 aa19.61■□□□□ 0.73
COL13A1-205ENST00000398978 AGAP9Q5VTM2 703 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms