RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 PAF1Q8N7H5 531 aa11.22□□□□□ -0.61
SRMP1-201ENST00000398959 ARL10Q8N8L6 244 aa11.22□□□□□ -0.61
SRMP1-201ENST00000398959 KYQ8NBH2 561 aa11.22□□□□□ -0.61
SRMP1-201ENST00000398959 ATL2Q8NHH9 583 aa11.22□□□□□ -0.61
SRMP1-201ENST00000398959 PCDH19Q8TAB3 1148 aa11.22□□□□□ -0.61
SRMP1-201ENST00000398959 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.22□□□□□ -0.61
SRMP1-201ENST00000398959 APOOQ9BUR5 198 aa11.22□□□□□ -0.61
SRMP1-201ENST00000398959 EDEM3Q9BZQ6 932 aa11.22□□□□□ -0.61
SRMP1-201ENST00000398959 PCDH12Q9NPG4 1184 aa11.22□□□□□ -0.61
SRMP1-201ENST00000398959 WDR70Q9NW82 654 aa11.22□□□□□ -0.61
SRMP1-201ENST00000398959 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.22□□□□□ -0.61
SRMP1-201ENST00000398959 KLQ9UEF7 1012 aa11.22□□□□□ -0.61
SRMP1-201ENST00000398959 GPR34Q9UPC5 381 aa11.22□□□□□ -0.61
SRMP1-201ENST00000398959 TCRBV5S1A1TA0A578 114 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 TSPAN11A1L157 253 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 PMS2P1A4D2B8 440 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 CAPN8A6NHC0 703 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 ARHGAP42A6NI28 874 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 LGALS16A8MUM7 142 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 CDRT15L2A8MXV6 281 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 J3KR12 359 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 EEF2KO00418 725 aaKnown RBP11.21□□□□□ -0.61
SRMP1-201ENST00000398959 CASC3O15234 703 aaKnown RBP11.21□□□□□ -0.61
SRMP1-201ENST00000398959 TNFSF15O95150 251 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 ZIC2O95409 532 aaPredicted RBP11.21□□□□□ -0.61
SRMP1-201ENST00000398959 CCDC172P0C7W6 258 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 PLA2G2AP14555 144 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 SERPINA4P29622 427 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 HTR7P34969 479 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 MMP12P39900 470 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 LIG3P49916 1009 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 NDST2P52849 883 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 SRP54P61011 504 aaKnown RBP11.21□□□□□ -0.61
SRMP1-201ENST00000398959 VAC14Q08AM6 782 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 NFATC4Q14934 902 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 ALG11Q2TAA5 492 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 WSCD2Q2TBF2 565 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 PPP1R15BQ5SWA1 713 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 BRAT1Q6PJG6 821 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 SASS6Q6UVJ0 657 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 PCSK4Q6UW60 755 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 MCOLN2Q8IZK6 566 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 SDR16C5Q8N3Y7 309 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 CCDC74AQ96AQ1 378 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 PRR11Q96HE9 360 aaPredicted RBP11.21□□□□□ -0.61
SRMP1-201ENST00000398959 CELF6Q96J87 481 aaKnown RBP11.21□□□□□ -0.61
SRMP1-201ENST00000398959 WDR92Q96MX6 357 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 ZNF641Q96N77 438 aaPredicted RBP11.21□□□□□ -0.61
SRMP1-201ENST00000398959 GFM1Q96RP9 751 aaKnown RBP11.21□□□□□ -0.61
SRMP1-201ENST00000398959 TUBGCP5Q96RT8 1024 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 LRRC19Q9H756 370 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 ATP13A3Q9H7F0 1226 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 PDFQ9HBH1 243 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 EPB41L5Q9HCM4 733 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 LMBRD1Q9NUN5 540 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 GPATCH2LQ9NWQ4 482 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 LIMA1Q9UHB6 759 aaKnown RBP11.21□□□□□ -0.61
SRMP1-201ENST00000398959 AP4E1Q9UPM8 1137 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 OR1A2Q9Y585 309 aa11.21□□□□□ -0.61
SRMP1-201ENST00000398959 CFAP46Q8IYW2 2715 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 NTN3O00634 580 aaPredicted RBP11.2□□□□□ -0.62
SRMP1-201ENST00000398959 DAPK3O43293 454 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 BUB1BO60566 1050 aaPredicted RBP11.2□□□□□ -0.62
SRMP1-201ENST00000398959 PRAMEF11O60813 436 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 PALMO75781 387 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 TNFP01375 233 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 PRKCGP05129 697 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 ITGA2BP08514 1039 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 FERP16591 822 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 PSMA2P25787 234 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 MLLT3P42568 568 aaPredicted RBP11.2□□□□□ -0.62
SRMP1-201ENST00000398959 PAPOLAP51003 745 aaKnown RBP11.2□□□□□ -0.62
SRMP1-201ENST00000398959 PDX1P52945 283 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 MYL5Q02045 173 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 MTM1Q13496 603 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 AGERQ15109 404 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 ZSCAN23Q3MJ62 389 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 ACAD10Q6JQN1 1059 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 CCDC81Q6ZN84 652 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 SRLQ86TD4 932 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 CAMK1DQ8IU85 385 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 OR6C4Q8NGE1 309 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 WBP1Q96G27 269 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 LIN37Q96GY3 246 aaPredicted RBP11.2□□□□□ -0.62
SRMP1-201ENST00000398959 ERGIC2Q96RQ1 377 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 CINPQ9BW66 212 aaPredicted RBP11.2□□□□□ -0.62
SRMP1-201ENST00000398959 SLC39A8Q9C0K1 460 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 STRADBQ9C0K7 418 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 DHX35Q9H5Z1 703 aaKnown RBP11.2□□□□□ -0.62
SRMP1-201ENST00000398959 SP110Q9HB58 689 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 ANO10Q9NW15 660 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 RABGEF1Q9UJ41 708 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 ATP8A1Q9Y2Q0 1164 aa11.2□□□□□ -0.62
SRMP1-201ENST00000398959 TMCO5BA8MYB1 307 aa11.19□□□□□ -0.62
SRMP1-201ENST00000398959 EIF3CLB5ME19 914 aaKnown RBP11.19□□□□□ -0.62
SRMP1-201ENST00000398959 D6RAR5 112 aa11.19□□□□□ -0.62
SRMP1-201ENST00000398959 TMX2-CTNND1H3BSU7 103 aa11.19□□□□□ -0.62
SRMP1-201ENST00000398959 DFFAO00273 331 aa11.19□□□□□ -0.62
SRMP1-201ENST00000398959 CACNB4O00305 520 aaPredicted RBP11.19□□□□□ -0.62
SRMP1-201ENST00000398959 PLD2O14939 933 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms