RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 PARP6Q2NL67 630 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 RABGEF1Q9UJ41 708 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 ARFGEF2Q9Y6D5 1785 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 SLC25A14O95258 325 aaPredicted RBP14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 ZNF24P17028 368 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 GPAT3Q53EU6 434 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 SPATA6LQ8N4H0 392 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 VCPIP1Q96JH7 1222 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 DUSP9Q99956 384 aaKnown RBP14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 TMEM175Q9BSA9 504 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 BDH2Q9BUT1 245 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 NEUROD4Q9HD90 331 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 COG5Q9UP83 839 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 ALAS2P22557 587 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 ST13P50502 369 aaKnown RBP14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 PIGZQ86VD9 579 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 PSTKQ8IV42 348 aaKnown RBP14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 C12orf29Q8N999 325 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 FBXO30Q8TB52 745 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 GDPD5Q8WTR4 605 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 IL23AQ9NPF7 189 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 PCDH12Q9NPG4 1184 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 PDP2Q9P2J9 529 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 FCHO1O14526 889 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 MYL12BO14950 172 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 PPP3CAQ08209 521 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 GRSF1Q12849 480 aaKnown RBP eCLIP14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 NT5DC1Q5TFE4 455 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 PRMT9Q6P2P2 845 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 BTN2A1Q7KYR7 527 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 METTL3Q86U44 580 aaKnown RBP14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 MOSPD2Q8NHP6 518 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 DEC1Q9P2X7 70 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 SLC12A4Q9UP95 1085 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 CCDC166P0CW27 439 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 PKNOX1P55347 436 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 CORO7P57737 925 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 ERVK-21P61565 698 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 PTSQ03393 145 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 STK40Q8N2I9 435 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 RXFP1Q9HBX9 757 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 SLC27A6Q9Y2P4 619 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 STARD13Q9Y3M8 1113 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 A0A1W2PQH9 124 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 KCNH1O95259 989 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 TM4SF4P48230 202 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 TSNQ15631 228 aaKnown RBP14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 NEPROQ6NW34 567 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 FAM151BQ6UXP7 276 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 SLC39A5Q6ZMH5 540 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 CDRT15Q96T59 188 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 DHX33Q9H6R0 707 aaKnown RBP14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 TLR9Q9NR96 1032 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 SPATA2Q9UM82 520 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 RGPD1P0DJD0 1748 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 APOC4-APOC2K7ER74 178 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 PIGNO95427 931 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 APOC2P02655 101 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 ZSWIM7Q19AV6 140 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 FAM45AQ8TCE6 357 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 GTPBP1O00178 669 aaKnown RBP14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 PRMT3O60678 531 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 SLC25A12O75746 678 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 PIAS1O75925 651 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 KLHL18O94889 574 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 CLPTM1O96005 669 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 TSPAN19P0C672 248 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 CCNB1P14635 433 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 ST3GAL1Q11201 340 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 ALG11Q2TAA5 492 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 PDZK1Q5T2W1 519 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 PRSS55Q6UWB4 352 aaPredicted RBP14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 SCIMPQ6UWF3 145 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 PCDH20Q8N6Y1 951 aaKnown RBP14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 SHDQ96IW2 340 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 SEMA3CQ99985 751 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 RAD21L1Q9H4I0 556 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 EPS8L2Q9H6S3 715 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 MAT2BQ9NZL9 334 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 ASF1AQ9Y294 204 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 LDLRP01130 860 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 FSHRP23945 695 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 HK2P52789 917 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 C17orf99Q6UX52 265 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 C2orf15Q8WU43 125 aaKnown RBP14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 DTNBP1Q96EV8 351 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 SNX27Q96L92 541 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 UGT2B28Q9BY64 529 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 DUSP16Q9BY84 665 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 MYLK2Q9H1R3 596 aa14.31□□□□□ -0.12
PCDHA11-201ENST00000398640 MDM4O15151 490 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 SNAI1O95863 264 aaPredicted RBP14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 NEK3P51956 506 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 PCID2Q5JVF3 399 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 STXBP5Q5T5C0 1151 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 TRIQKQ629K1 86 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 PACS1Q6VY07 963 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 MON1AQ86VX9 555 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 ATAD1Q8NBU5 361 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms