RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 TRABD2AQ86V40 505 aa11.85□□□□□ -0.51
TMF1-201ENST00000398559 GRIN3AQ8TCU5 1115 aa11.85□□□□□ -0.51
TMF1-201ENST00000398559 PANX1Q96RD7 426 aa11.85□□□□□ -0.51
TMF1-201ENST00000398559 RPRD1BQ9NQG5 326 aaKnown RBP11.85□□□□□ -0.51
TMF1-201ENST00000398559 UXTQ9UBK9 157 aaPredicted RBP11.85□□□□□ -0.51
TMF1-201ENST00000398559 RPL26L1Q9UNX3 145 aaKnown RBP11.85□□□□□ -0.51
TMF1-201ENST00000398559 HBS1LQ9Y450 684 aaKnown RBP11.85□□□□□ -0.51
TMF1-201ENST00000398559 CCDC162PA2VCL2 907 aa11.85□□□□□ -0.51
TMF1-201ENST00000398559 PAPSS1O43252 624 aaPredicted RBP11.85□□□□□ -0.51
TMF1-201ENST00000398559 MGRN1O60291 552 aa11.85□□□□□ -0.51
TMF1-201ENST00000398559 PSIP1O75475 530 aaKnown RBP11.85□□□□□ -0.51
TMF1-201ENST00000398559 ARF5P84085 180 aa11.85□□□□□ -0.51
TMF1-201ENST00000398559 FRMPD1Q5SYB0 1578 aa11.85□□□□□ -0.51
TMF1-201ENST00000398559 PHF13Q86YI8 300 aaPredicted RBP11.85□□□□□ -0.51
TMF1-201ENST00000398559 FAM47BQ8NA70 645 aa11.85□□□□□ -0.51
TMF1-201ENST00000398559 DGCR14Q96DF8 476 aaKnown RBP11.85□□□□□ -0.51
TMF1-201ENST00000398559 ING3Q9NXR8 418 aa11.85□□□□□ -0.51
TMF1-201ENST00000398559 POLR3HQ9Y535 204 aaPredicted RBP11.85□□□□□ -0.51
TMF1-201ENST00000398559 LOC110117498-PIK3R3F6TDL0 507 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 RPL7AP62424 266 aaKnown RBP11.84□□□□□ -0.51
TMF1-201ENST00000398559 IL18R1Q13478 541 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 INSCQ1MX18 579 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 CXXC5Q7LFL8 322 aaKnown RBP11.84□□□□□ -0.51
TMF1-201ENST00000398559 R3HCC1LQ7Z5L2 792 aaKnown RBP11.84□□□□□ -0.51
TMF1-201ENST00000398559 PQLC1Q8N2U9 271 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 COX4I2Q96KJ9 171 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 OR52E6Q96RD3 313 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 ZNF670Q9BS34 389 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 TMPRSS4Q9NRS4 437 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 MAP2P11137 1827 aaKnown RBP11.84□□□□□ -0.51
TMF1-201ENST00000398559 RGL2O15211 777 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 FARP2O94887 1054 aaPredicted RBP11.84□□□□□ -0.51
TMF1-201ENST00000398559 OTCP00480 354 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 RPL4P36578 427 aaKnown RBP11.84□□□□□ -0.51
TMF1-201ENST00000398559 NAA20P61599 178 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 GALNT3Q14435 633 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 TXNDC11Q6PKC3 985 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 OR4A15Q8NGL6 344 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 UBE2E3Q969T4 207 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 LGMNQ99538 433 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 FNDC11Q9BVV2 318 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 GSC2O15499 205 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 MTRF1O75570 445 aaKnown RBP11.84□□□□□ -0.51
TMF1-201ENST00000398559 ALOX5P09917 674 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 SMIM11AP58511 58 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 CNTN2Q02246 1040 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 PTPRNQ16849 979 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 FAM131AQ6UXB0 335 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 DEF8Q6ZN54 512 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 TEX47Q8TBZ9 253 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 CD101Q93033 1021 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 GALNT8Q9NY28 637 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 PPIEQ9UNP9 301 aaKnown RBP11.84□□□□□ -0.51
TMF1-201ENST00000398559 R3HDM2Q9Y2K5 976 aaKnown RBP11.84□□□□□ -0.51
TMF1-201ENST00000398559 RFXANKO14593 260 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 OMPP47874 163 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 CDK9P50750 372 aaKnown RBP11.84□□□□□ -0.51
TMF1-201ENST00000398559 GTF2BQ00403 316 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 DDR1Q08345 913 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 PRKG2Q13237 762 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 FBXL19Q6PCT2 694 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 PACS1Q6VY07 963 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 PAGE2Q7Z2X7 111 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 UNC93AQ86WB7 457 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 PRDM12Q9H4Q4 367 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 KCNMB3Q9NPA1 279 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 THG1LQ9NWX6 298 aaKnown RBP11.84□□□□□ -0.51
TMF1-201ENST00000398559 ZNHIT2Q9UHR6 403 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 TSPAN9O75954 239 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 GALK1P51570 392 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 CNSTQ6PJW8 725 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 ARRDC4Q8NCT1 418 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 ZFP28Q8NHY6 868 aa11.84□□□□□ -0.51
TMF1-201ENST00000398559 AHCYL2Q96HN2 611 aaKnown RBP11.84□□□□□ -0.51
TMF1-201ENST00000398559 TFECO14948 347 aaPredicted RBP11.83□□□□□ -0.51
TMF1-201ENST00000398559 ALOX15BO15296 676 aa11.83□□□□□ -0.51
TMF1-201ENST00000398559 ADSLP30566 484 aaPredicted RBP11.83□□□□□ -0.51
TMF1-201ENST00000398559 CYP2C18P33260 490 aa11.83□□□□□ -0.51
TMF1-201ENST00000398559 TNFSF9P41273 254 aa11.83□□□□□ -0.51
TMF1-201ENST00000398559 SLC20A2Q08357 652 aa11.83□□□□□ -0.51
TMF1-201ENST00000398559 C6orf52Q5T4I8 152 aa11.83□□□□□ -0.51
TMF1-201ENST00000398559 AGMOQ6ZNB7 445 aa11.83□□□□□ -0.51
TMF1-201ENST00000398559 ATL1Q8WXF7 558 aa11.83□□□□□ -0.51
TMF1-201ENST00000398559 HTRA1Q92743 480 aa11.83□□□□□ -0.51
TMF1-201ENST00000398559 TRIT1Q9H3H1 467 aaKnown RBP11.83□□□□□ -0.51
TMF1-201ENST00000398559 DDX4Q9NQI0 724 aaKnown RBP11.83□□□□□ -0.51
TMF1-201ENST00000398559 ADARB2Q9NS39 739 aaKnown RBP11.83□□□□□ -0.51
TMF1-201ENST00000398559 TRPV2Q9Y5S1 764 aa11.83□□□□□ -0.51
TMF1-201ENST00000398559 CCNYL3P0C7X3 344 aa11.83□□□□□ -0.52
TMF1-201ENST00000398559 TGFBR2P37173 567 aa11.83□□□□□ -0.52
TMF1-201ENST00000398559 PSEN2P49810 448 aa11.83□□□□□ -0.52
TMF1-201ENST00000398559 ZNHIT3Q15649 155 aaPredicted RBP11.83□□□□□ -0.52
TMF1-201ENST00000398559 RNF220Q5VTB9 566 aa11.83□□□□□ -0.52
TMF1-201ENST00000398559 RPTNQ6XPR3 784 aa11.83□□□□□ -0.52
TMF1-201ENST00000398559 GALNT5Q7Z7M9 940 aa11.83□□□□□ -0.52
TMF1-201ENST00000398559 GPR180Q86V85 440 aa11.83□□□□□ -0.52
TMF1-201ENST00000398559 NETO2Q8NC67 525 aa11.83□□□□□ -0.52
TMF1-201ENST00000398559 PIH1D2Q8WWB5 315 aa11.83□□□□□ -0.52
TMF1-201ENST00000398559 KLHL32Q96NJ5 620 aa11.83□□□□□ -0.52
TMF1-201ENST00000398559 BTBD9Q96Q07 612 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms