RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 SPATA7Q9P0W8 599 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 INVSQ9Y283 1065 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 UNC13CQ8NB66 2214 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SIPA1L1O43166 1804 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 PTPRFP10586 1907 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 PRRC2BQ5JSZ5 2229 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 ICE1Q9Y2F5 2266 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 USP27XA6NNY8 438 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CYB561D2O14569 222 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 TRIM24O15164 1050 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 PSKH1P11801 424 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ZNF30P17039 623 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ADORA2AP29274 412 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 WEE1P30291 646 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 BLVRAP53004 296 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 TIMM10P62072 90 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 EIF5AP63241 154 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 LAMTOR4Q0VGL1 99 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 FIGNQ5HY92 759 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SEL1L3Q68CR1 1132 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ERICH5Q6P6B1 374 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 DCLRE1AQ6PJP8 1040 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SLC24A5Q71RS6 500 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 GALNT13Q8IUC8 556 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 GLYCTKQ8IVS8 523 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 LINC00301Q8NCQ3 95 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 PEX13Q92968 403 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CLP1Q92989 425 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 MYLPFQ96A32 169 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SFXN2Q96NB2 322 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ATF5Q9Y2D1 282 aaPredicted RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 A0A1W2PQ45 241 aaPredicted RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 A0A1W2PQY0 241 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 UBE2QL1A1L167 161 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 FTCDNL1E5RQL4 147 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ACSL3O95573 720 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 LTFP02788 710 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 RLN1P04808 185 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 EPB42P16452 691 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 MTHFRP42898 656 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SOX9P48436 509 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SARSP49591 514 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 GMPSP49915 693 aaPredicted RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 PDIA2Q13087 525 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 ZNF549Q6P9A3 640 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 USP17L6PQ6QN14 398 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ZNF783Q6ZMS7 281 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 C17orf64Q86WR6 236 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 TBC1D21Q8IYX1 336 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CMTR1Q8N1G2 835 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 ACMSDQ8TDX5 336 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SH3RF3Q8TEJ3 882 aaPredicted RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 IRF7Q92985 503 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SECISBP2Q96T21 854 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 RBM15Q96T37 977 aaKnown RBP eCLIP2.74□□□□□ -1.973e-6■■■□□ 18.1
CHD9-202ENST00000398510 PDCD2LQ9BRP1 358 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 HIPK2Q9H2X6 1198 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 TMEM134Q9H6X4 195 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 PDE7BQ9NP56 450 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 GPRC5DQ9NZD1 345 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CEP192Q8TEP8 1941 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 BCLAF3A2AJT9 711 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 AGPSO00116 658 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 BCAS2O75934 225 aaPredicted RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 RHOBTB1O94844 696 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SERPINA3P01011 423 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ICAM2P13598 275 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 GCSHP23434 173 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 DNAJB1P25685 340 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SESN3P58005 492 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ZNF33AQ06730 810 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SPIRE1Q08AE8 756 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ZNF846Q147U1 533 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 TRMT5Q32P41 509 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 ADCK5Q3MIX3 580 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 LRRC23Q53EV4 343 aaPredicted RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 COMMD2Q86X83 199 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 TDRPQ86YL5 185 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 C19orf18Q8NEA5 215 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 WDR36Q8NI36 951 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 ZDHHC12Q96GR4 267 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 C12orf66Q96MD2 445 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 STRBPQ96SI9 672 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 AGPAT1Q99943 283 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 AP1M1Q9BXS5 423 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 RANBP17Q9H2T7 1088 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 ITM2CQ9NQX7 267 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 AFF4Q9UHB7 1163 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 VPS4AQ9UN37 437 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 PRELID3BQ9Y3B1 194 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 HEMK1Q9Y5R4 338 aaPredicted RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 CHD3Q12873 2000 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 hCG_1809904A0A1W2PP81 198 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 A0A1W2PPE2 198 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 A0A1W2PR64 198 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 A0A1W2PRV1 198 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 HYKKA2RU49 373 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 FAM86C2PA6NEL3 165 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 FAM25AB3EWG3 89 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 FAM25CB3EWG5 89 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms