RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 TRIP6Q15654 476 aaKnown RBP16.82■□□□□ 0.28
APTR-201ENST00000398043 TPRG1LQ5T0D9 272 aa16.82■□□□□ 0.28
APTR-201ENST00000398043 TIGD7Q6NT04 549 aaPredicted RBP16.82■□□□□ 0.28
APTR-201ENST00000398043 MFSD7Q6UXD7 560 aa16.82■□□□□ 0.28
APTR-201ENST00000398043 Q6ZSR6 202 aa16.82■□□□□ 0.28
APTR-201ENST00000398043 OXR1Q8N573 874 aa16.82■□□□□ 0.28
APTR-201ENST00000398043 TP53I13Q8NBR0 393 aaPredicted RBP16.82■□□□□ 0.28
APTR-201ENST00000398043 ACRBPQ8NEB7 543 aa16.82■□□□□ 0.28
APTR-201ENST00000398043 RNF25Q96BH1 459 aaPredicted RBP16.82■□□□□ 0.28
APTR-201ENST00000398043 OLFM3Q96PB7 478 aa16.82■□□□□ 0.28
APTR-201ENST00000398043 WRAP53Q9BUR4 548 aaKnown RBP16.82■□□□□ 0.28
APTR-201ENST00000398043 CAAP1Q9H8G2 361 aa16.82■□□□□ 0.28
APTR-201ENST00000398043 LUC7LQ9NQ29 371 aaKnown RBP16.82■□□□□ 0.28
APTR-201ENST00000398043 TOR4AQ9NXH8 423 aa16.82■□□□□ 0.28
APTR-201ENST00000398043 AMACRQ9UHK6 382 aa16.82■□□□□ 0.28
APTR-201ENST00000398043 PCDHGC4Q9Y5F7 938 aa16.82■□□□□ 0.28
APTR-201ENST00000398043 ACACBO00763 2458 aa16.82■□□□□ 0.28
APTR-201ENST00000398043 ASXL3Q9C0F0 2248 aa16.82■□□□□ 0.28
APTR-201ENST00000398043 CHD8Q9HCK8 2581 aa16.82■□□□□ 0.28
APTR-201ENST00000398043 ZFC3H1O60293 1989 aaKnown RBP16.81■□□□□ 0.28
APTR-201ENST00000398043 CFAP69A5D8W1 941 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 SPOPO43791 374 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 DKK1O94907 266 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 CCNB1P14635 433 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 GM2AP17900 193 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 MX2P20592 715 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 MARCKSL1P49006 195 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 SIM1P81133 766 aaPredicted RBP16.81■□□□□ 0.28
APTR-201ENST00000398043 FZD2Q14332 565 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 SUZ12Q15022 739 aaKnown RBP16.81■□□□□ 0.28
APTR-201ENST00000398043 ZFYVE27Q5T4F4 411 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 DPPA4Q7L190 304 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 GATAD2AQ86YP4 633 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 DCP2Q8IU60 420 aaKnown RBP16.81■□□□□ 0.28
APTR-201ENST00000398043 KATNAL2Q8IYT4 538 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 BBS5Q8N3I7 341 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 SPC24Q8NBT2 197 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 ARRDC2Q8TBH0 407 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 CXorf40AQ8TE69 158 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 SETD7Q8WTS6 366 aaKnown RBP16.81■□□□□ 0.28
APTR-201ENST00000398043 NSMCE1Q8WV22 266 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 LGMNQ99538 433 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 NT5MQ9NPB1 228 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 SCUBE2Q9NQ36 999 aa16.81■□□□□ 0.28
APTR-201ENST00000398043 MBNL1Q9NR56 388 aaKnown RBP16.81■□□□□ 0.28
APTR-201ENST00000398043 RP1P56715 2156 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 SPTY2D1-AS1A0A0U1RR47 76 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 APOL1O14791 398 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 FZD6O60353 706 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 C6P13671 934 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 XPAP23025 273 aaPredicted RBP16.8■□□□□ 0.28
APTR-201ENST00000398043 GRK6P43250 576 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 ARRB1P49407 418 aaPredicted RBP16.8■□□□□ 0.28
APTR-201ENST00000398043 LIG3P49916 1009 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 VAV2P52735 878 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 POLR2LP62875 67 aaKnown RBP16.8■□□□□ 0.28
APTR-201ENST00000398043 SEMG2Q02383 582 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 ADCY2Q08462 1091 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 WSCD2Q2TBF2 565 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 NPNTQ6UXI9 565 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 LIPIQ6XZB0 460 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 SPOCD1Q6ZMY3 1216 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 CBARPQ8N350 705 aaPredicted RBP16.8■□□□□ 0.28
APTR-201ENST00000398043 RHBDD1Q8TEB9 315 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 KRT35Q92764 455 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 IFT43Q96FT9 208 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 CALR3Q96L12 384 aaKnown RBP16.8■□□□□ 0.28
APTR-201ENST00000398043 IL12RB2Q99665 862 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 SEMA3CQ99985 751 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 ANP32EQ9BTT0 268 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 COQ6Q9Y2Z9 468 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 PPIL1Q9Y3C6 166 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 SCN8AQ9UQD0 1980 aa16.8■□□□□ 0.28
APTR-201ENST00000398043 A0A0U1RQJ8 604 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 A0A1W2PQ67 120 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 FPGTO14772 594 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 PGLSO95336 258 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 TOP3BO95985 862 aaKnown RBP16.79■□□□□ 0.28
APTR-201ENST00000398043 HLA-DQB2P05538 268 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 GIMD1P0DJR0 217 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 TNNT1P13805 278 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 RABIFP47224 123 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 IFI35P80217 286 aaPredicted RBP16.79■□□□□ 0.28
APTR-201ENST00000398043 DSC2Q02487 901 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 NIPAL4Q0D2K0 466 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 ZBTB17Q13105 803 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 CFAP58Q5T655 872 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 ERAP2Q6P179 960 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 PTAR1Q7Z6K3 402 aaPredicted RBP16.79■□□□□ 0.28
APTR-201ENST00000398043 SLCO6A1Q86UG4 719 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 CCDC13Q8IYE1 715 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 SLC25A45Q8N413 288 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 CNTD1Q8N815 330 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 LRRC57Q8N9N7 239 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 PIH1D2Q8WWB5 315 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 MCCC1Q96RQ3 725 aaPredicted RBP16.79■□□□□ 0.28
APTR-201ENST00000398043 CDC6Q99741 560 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 POLR1EQ9GZS1 481 aaKnown RBP16.79■□□□□ 0.28
APTR-201ENST00000398043 RBM22Q9NW64 420 aaKnown RBP eCLIP16.79■□□□□ 0.28
APTR-201ENST00000398043 PNMA8BQ9ULN7 279 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms