RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 SPATA31D3P0C874 917 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 KCNA5P22460 613 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 ATP5F1P24539 256 aaPredicted RBP10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 HCAR3P49019 387 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 DLG1Q12959 904 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 SEMA3BQ13214 749 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 RBBP7Q16576 425 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 MS4A13Q5J8X5 152 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 EPGNQ6UW88 154 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 SPATA31D4Q6ZUB0 917 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 CUZD1Q86UP6 607 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 CENPLQ8N0S6 344 aaPredicted RBP10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 FBXW8Q8N3Y1 598 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 KLHDC9Q8NEP7 349 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 CEP70Q8NHQ1 597 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 EME1Q96AY2 570 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 ZNF419Q96HQ0 510 aaPredicted RBP10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 SUSD3Q96L08 255 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 TM6SF2Q9BZW4 377 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 KLHL4Q9C0H6 718 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 PLK2Q9NYY3 685 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 AFF4Q9UHB7 1163 aaKnown RBP10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 SNX13Q9Y5W8 968 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 AOC2O75106 756 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 FKBP6O75344 327 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 SEC24DO94855 1032 aaPredicted RBP10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 PPARGP37231 505 aaPredicted RBP10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 HARS2P49590 506 aaKnown RBP10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 CDC16Q13042 620 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 PTPRRQ15256 657 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 RAB41Q5JT25 222 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 THEMIS2Q5TEJ8 643 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 PM20D1Q6GTS8 502 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 SLC24A5Q71RS6 500 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 SAPCD2Q86UD0 394 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 OR6Y1Q8NGX8 325 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 IRGQQ8WZA9 623 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 TSPAN17Q96FV3 270 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 SCLYQ96I15 445 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 KIFC1Q9BW19 673 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 OSBPL2Q9H1P3 480 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 ABCG8Q9H221 673 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 TLE6Q9H808 572 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 EML4Q9HC35 981 aaKnown RBP10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 ATP13A1Q9HD20 1204 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 TIMM22Q9Y584 194 aa10.5□□□□□ -0.73
CPSF1P1-201ENST00000397477 SERPINF2P08697 491 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 OR1D2P34982 312 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 SGO1Q5FBB7 561 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 KCTD11Q693B1 232 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 CARNMT1Q8N4J0 409 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 ANKRD49Q8WVL7 239 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 HAPLN3Q96S86 360 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 MRPL57Q9BQC6 102 aaKnown RBP10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 DRC3Q9H069 523 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 PRDM5Q9NQX1 630 aaPredicted RBP10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 MKS1Q9NXB0 559 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 RNF112Q9ULX5 631 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 ANKRD6Q9Y2G4 727 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 MAGEA13PA6NCF6 341 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 UBXN8O00124 270 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 DNAJA2O60884 412 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 GLDCP23378 1020 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 ACLYP53396 1101 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 TSTD2Q5T7W7 516 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 SLC25A51Q9H1U9 297 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 SMOC2Q9H3U7 446 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 PRDM16Q9HAZ2 1276 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 RNF186Q9NXI6 227 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 PARP14Q460N5 1801 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 MGAMO43451 1857 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 TMEM114B3SHH9 223 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 MATN2O00339 956 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 KIF1CO43896 1103 aaKnown RBP10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 SNX2O60749 519 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 GOT2P00505 430 aaKnown RBP10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 LINC00032P0C843 101 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 CYP2C18P33260 490 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 RAP1GDS1P52306 607 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 ECT2LQ008S8 904 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 CDK18Q07002 472 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 LBRQ14739 615 aaKnown RBP10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 SIRPB2Q5JXA9 342 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 MRNIPQ6NTE8 343 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 FAM171BQ6P995 826 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 AMIGO2Q86SJ2 522 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 MFSD6LQ8IWD5 586 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 OR4K2Q8NGD2 314 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 TRIM4Q9C037 500 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 POLR1EQ9GZS1 481 aaKnown RBP10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 ADAMTS6Q9UKP5 1117 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 SORCS3Q9UPU3 1222 aa10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 COPG1Q9Y678 874 aaKnown RBP10.49□□□□□ -0.73
CPSF1P1-201ENST00000397477 TRPC5OSA6NMA1 111 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 PSMD12O00232 456 aaPredicted RBP10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 PPP6CO00743 305 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 AKAP10O43572 662 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 KATNA1O75449 491 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 SMNDC1O75940 238 aaKnown RBP eCLIP10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 BAIAP3O94812 1187 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms