RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 EGFLAMQ63HQ2 1017 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 ANKMY2Q8IV38 441 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 IGDCC3Q8IVU1 814 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 MPP5Q8N3R9 675 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 DNAAF3Q8N9W5 541 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 PTPRN2Q92932 1015 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 IFT43Q96FT9 208 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 MSANTD3Q96H12 275 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 C9orf72Q96LT7 481 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 CPEB1Q9BZB8 566 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 EPB41L4BQ9H329 900 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 MTG2Q9H4K7 406 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 NINJ2Q9NZG7 142 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 CHKBQ9Y259 395 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 WDR87Q6ZQQ6 2873 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 GVINP1Q7Z2Y8 2422 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 PTPRZ1P23471 2315 aaPredicted RBP17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 ATG2BQ96BY7 2078 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 SDR42E2A6NKP2 422 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 TRAFD1O14545 582 aaPredicted RBP17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 HTRA2O43464 458 aaPredicted RBP17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 PIGNO95427 931 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 POP4O95707 220 aaKnown RBP17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 NDST3O95803 873 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 HLA-DPA1P20036 260 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 KIR2DL1P43626 348 aaPredicted RBP17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 NPY2RP49146 381 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 DMWDQ09019 674 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 MSLNQ13421 630 aaPredicted RBP17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 ENPP2Q13822 863 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 CCINQ13939 588 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 CCDC38Q502W7 563 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 TMEM196Q5HYL7 178 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 SPDYCQ5MJ68 293 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 CERCAMQ5T4B2 595 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 EMC10Q5UCC4 262 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 FSTL4Q6MZW2 842 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 PKN3Q6P5Z2 889 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 TRMT10CQ7L0Y3 403 aaKnown RBP17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 CAMK1DQ8IU85 385 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 RYBPQ8N488 228 aaPredicted RBP17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 DCLK2Q8N568 766 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 SLC25A41Q8N5S1 370 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 ZNF366Q8N895 744 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 CHST14Q8NCH0 376 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 FBXO36Q8NEA4 188 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 TUBGCP5Q96RT8 1024 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 ATP13A3Q9H7F0 1226 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 ZNF446Q9NWS9 450 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 SYBUQ9NX95 663 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 CHMP2BQ9UQN3 213 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 FANCMQ8IYD8 2048 aa17.06■□□□□ 0.32
TSPAN4-205ENST00000397406 RIPK2O43353 540 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 BNIP3LO60238 219 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 SOCS5O75159 536 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 FGF1P05230 155 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 PDHA1P08559 390 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 HLA-EP13747 358 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 TPH1P17752 444 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 CA4P22748 312 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 PRKCHP24723 683 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 HSD17B3P37058 310 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 IL12RB1P42701 662 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 RECQLP46063 649 aaPredicted RBP17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 CRADDP78560 199 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 BCL2L1Q07817 233 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 GALNT3Q14435 633 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 KYNUQ16719 465 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 HNRNPA1L2Q32P51 320 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 PYROXD1Q8WU10 500 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 ACOX2Q99424 681 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 EBNA1BP2Q99848 306 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 PABPC3Q9H361 631 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 ZDHHC6Q9H6R6 413 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 BFARQ9NZS9 450 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 WASF2Q9Y6W5 498 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 FAM186AA6NE01 2351 aa17.05■□□□□ 0.32
TSPAN4-205ENST00000397406 EDDM13A0A1B0GTR0 161 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 K7ESF4 209 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 PGLSO95336 258 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 TTC4O95801 387 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 EGFP01133 1207 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 DRD1P21728 446 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 SERPINA4P29622 427 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 RAD51Q06609 339 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 CASP8Q14790 479 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 GRM3Q14832 879 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 C9orf64Q5T6V5 341 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 SERPINA13PQ6UXR4 307 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 UBLCP1Q8WVY7 318 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 STAMBPL1Q96FJ0 436 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 HEPHQ9BQS7 1158 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 FUT8Q9BYC5 575 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 IL22Q9GZX6 179 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 PLAC1Q9HBJ0 212 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 LRRC4CQ9HCJ2 640 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 ZDHHC4Q9NPG8 344 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 POLR3BQ9NW08 1133 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 ZSCAN32Q9NX65 697 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 CACNA2D2Q9NY47 1150 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms