RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 CD101Q93033 1021 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 AP2M1Q96CW1 435 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 Q96MT0 163 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 TNKS2Q9H2K2 1166 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 PRDM16Q9HAZ2 1276 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 COG5Q9UP83 839 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 COLEC10Q9Y6Z7 277 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 PPP1R3GB7ZBB8 358 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 SLC28A2O43868 658 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 RSL1D1O76021 490 aaKnown RBP7.23□□□□□ -1.25
UPF2-203ENST00000397053 MLYCDO95822 493 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 CHRNGP07510 517 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 CCNB1P14635 433 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 NT5EP21589 574 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 BLKP51451 505 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 CRYBB1P53674 252 aaPredicted RBP7.23□□□□□ -1.25
UPF2-203ENST00000397053 NAGLUP54802 743 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 UGT2B15P54855 530 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 AP1S2P56377 157 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 CYP4F2P78329 520 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 USP4Q13107 963 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 TUSC3Q13454 348 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 ELOAQ14241 798 aaKnown RBP7.23□□□□□ -1.25
UPF2-203ENST00000397053 PPP2R2DQ66LE6 453 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 TCEAL6Q6IPX3 200 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 IRGCQ6NXR0 463 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 GCNT7Q6ZNI0 430 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 SNX32Q86XE0 403 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 REM2Q8IYK8 340 aaPredicted RBP7.23□□□□□ -1.25
UPF2-203ENST00000397053 RBFAQ8N0V3 343 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 CDYL2Q8N8U2 506 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 MIEF2Q96C03 454 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 PANX1Q96RD7 426 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 GTPBP2Q9BX10 602 aaKnown RBP7.23□□□□□ -1.25
UPF2-203ENST00000397053 ARHGEF4Q9NR80 690 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 SEMA3GQ9NS98 782 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 TFR2Q9UP52 801 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 PCDHGC5Q9Y5F6 944 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 ATRXP46100 2492 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 C9J4A7 227 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 SEPT4O43236 478 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 FAM86B2P0C5J1 330 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 SELPP16109 830 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 SSTR1P30872 391 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 CDK18Q07002 472 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 SMARCB1Q12824 385 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 TBX2Q13207 712 aaPredicted RBP7.23□□□□□ -1.25
UPF2-203ENST00000397053 CCINQ13939 588 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 TRMT5Q32P41 509 aaKnown RBP7.23□□□□□ -1.25
UPF2-203ENST00000397053 MON1AQ86VX9 555 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 RAVER1Q8IY67 606 aaKnown RBP7.23□□□□□ -1.25
UPF2-203ENST00000397053 PPCDCQ96CD2 204 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 ITCHQ96J02 903 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 KLHL4Q9C0H6 718 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 CRISPLD1Q9H336 500 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 CLN6Q9NWW5 311 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 CORO2BQ9UQ03 480 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 ERGIC3Q9Y282 383 aa7.23□□□□□ -1.25
UPF2-203ENST00000397053 APOC4-APOC2K7ER74 178 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 CCL16O15467 120 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 DCXO43602 365 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 PSIP1O75475 530 aaKnown RBP7.22□□□□□ -1.25
UPF2-203ENST00000397053 CLEC3AO75596 197 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 OTCP00480 354 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 APOC2P02655 101 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 TFEBP19484 476 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 MYL9P24844 172 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 RYKP34925 604 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 TGFBR2P37173 567 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 RPL38P63173 70 aaKnown RBP7.22□□□□□ -1.25
UPF2-203ENST00000397053 RAPSNQ13702 412 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 HYIQ5T013 277 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 ZNF276Q8N554 614 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 TEX47Q8TBZ9 253 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 OMA1Q96E52 524 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 C9orf16Q9BUW7 83 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 RIOX1Q9H6W3 641 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 DCLRE1BQ9H816 532 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 PLEKHA1Q9HB21 404 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 EQTNQ9NQ60 294 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 FBXO6Q9NRD1 293 aaPredicted RBP7.22□□□□□ -1.25
UPF2-203ENST00000397053 FAM105AQ9NUU6 356 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 NOX1Q9Y5S8 564 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 PTCH2Q9Y6C5 1203 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 HYKKA2RU49 373 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 PGRMC2O15173 223 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 TAL1P17542 331 aaPredicted RBP7.22□□□□□ -1.25
UPF2-203ENST00000397053 CTSOP43234 321 aaPredicted RBP7.22□□□□□ -1.25
UPF2-203ENST00000397053 CCT3P49368 545 aaKnown RBP7.22□□□□□ -1.25
UPF2-203ENST00000397053 IRAK1P51617 712 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 CLCN5P51795 746 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 CDK16Q00536 496 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 FAM151BQ6UXP7 276 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 HID1Q8IV36 788 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 TSTD1Q8NFU3 115 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 OR52K1Q8NGK4 314 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 GPR152Q8TDT2 470 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 EFHD2Q96C19 240 aaPredicted RBP7.22□□□□□ -1.25
UPF2-203ENST00000397053 DNAJC5Q9H3Z4 198 aa7.22□□□□□ -1.25
UPF2-203ENST00000397053 TMEM27Q9HBJ8 222 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms