RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 ARL8AQ96BM9 186 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 MFSD3Q96ES6 412 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 ATP6V1G3Q96LB4 118 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 LYSMD1Q96S90 227 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 HEPHQ9BQS7 1158 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 OSBPL1AQ9BXW6 950 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 TNKS2Q9H2K2 1166 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 TMEM245Q9H330 911 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 SUV39H2Q9H5I1 410 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 KCNK12Q9HB15 430 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 THAP10Q9P2Z0 257 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-209ENST00000397036 FAM50BQ9Y247 325 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 LDB2O43679 373 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 SIN3BO75182 1162 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 FAM155BO75949 473 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 CRTAMO95727 393 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 ATP5DP30049 168 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 MSH2P43246 934 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 ARCN1P48444 511 aaKnown RBP13.69□□□□□ -0.22
MCF2L-209ENST00000397036 MESP2Q0VG99 397 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 TAF1AQ15573 450 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-209ENST00000397036 LONRF1Q17RB8 773 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 SKIDA1Q1XH10 827 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 AAK1Q2M2I8 961 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 HNRNPA1L2Q32P51 320 aaKnown RBP13.69□□□□□ -0.22
MCF2L-209ENST00000397036 EMC10Q5UCC4 262 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 PDPK2PQ6A1A2 396 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 TRMT10BQ6PF06 316 aaKnown RBP13.69□□□□□ -0.22
MCF2L-209ENST00000397036 MARK2Q7KZI7 788 aaKnown RBP13.69□□□□□ -0.22
MCF2L-209ENST00000397036 SLC26A11Q86WA9 606 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 RALGPS2Q86X27 583 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-209ENST00000397036 CAMK1DQ8IU85 385 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 LMNTD2Q8IXW0 634 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 NDUFAF2Q8N183 169 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 ST13P5Q8NFI4 369 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-209ENST00000397036 CYB5D2Q8WUJ1 264 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 SCG3Q8WXD2 468 aaKnown RBP13.69□□□□□ -0.22
MCF2L-209ENST00000397036 SORCS1Q8WY21 1168 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 PTPRN2Q92932 1015 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 ZNF669Q96BR6 464 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-209ENST00000397036 TLCD1Q96CP7 247 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 RMDN1Q96DB5 314 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 CERS2Q96G23 380 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 MSANTD3Q96H12 275 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 NSMCE4AQ9NXX6 385 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.69□□□□□ -0.22
MCF2L-209ENST00000397036 PSMC3IPQ9P2W1 217 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-209ENST00000397036 DKK3Q9UBP4 350 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 SUN2Q9UH99 717 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 PHTF1Q9UMS5 762 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 PCDHB9Q9Y5E1 797 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 EDDM13A0A1B0GTR0 161 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 TLDC2A0PJX2 215 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 TSPAN11A1L157 253 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 TTC34A8MYJ7 566 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 H3BQF6 201 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 RGS16O15492 202 aaPredicted RBP13.68□□□□□ -0.22
MCF2L-209ENST00000397036 SLC7A4O43246 635 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 NMBRP28336 390 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 POLR2LP62875 67 aaKnown RBP13.68□□□□□ -0.22
MCF2L-209ENST00000397036 ILF2Q12905 390 aaKnown RBP13.68□□□□□ -0.22
MCF2L-209ENST00000397036 SKIV2LQ15477 1246 aaKnown RBP13.68□□□□□ -0.22
MCF2L-209ENST00000397036 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
MCF2L-209ENST00000397036 TTMPQ5BVD1 217 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 LGSNQ5TDP6 509 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 ESRP1Q6NXG1 681 aaKnown RBP13.68□□□□□ -0.22
MCF2L-209ENST00000397036 CAPN12Q6ZSI9 719 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 Q6ZVU0 165 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 CNTN4Q8IWV2 1026 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 DEFB123Q8N688 67 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 EPS8L3Q8TE67 593 aaKnown RBP13.68□□□□□ -0.22
MCF2L-209ENST00000397036 SGSM3Q96HU1 749 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 ZNF778Q96MU6 729 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 PAFAH2Q99487 392 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 P2RY13Q9BPV8 354 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 TRIM56Q9BRZ2 755 aaKnown RBP13.68□□□□□ -0.22
MCF2L-209ENST00000397036 LIMD1Q9UGP4 676 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 ACTL7BQ9Y614 415 aa13.68□□□□□ -0.22
MCF2L-209ENST00000397036 A0A0J9YYE9 177 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 C2orf81A6NN90 581 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 TRBC1P01850 177 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 CNTFP26441 200 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 SERPINB9P50453 376 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 GALK1P51570 392 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 EPHB1P54762 984 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 PFKPQ01813 784 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 DNAJC3Q13217 504 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 GALNT3Q14435 633 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 CNGA3Q16281 694 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 BRAT1Q6PJG6 821 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 GDPD4Q6W3E5 623 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 Q7L0L9 218 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 TMIEQ8NEW7 156 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 LPCAT1Q8NF37 534 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 GABPB2Q8TAK5 448 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-209ENST00000397036 DCAKDQ8WVC6 231 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 SCRN2Q96FV2 425 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 MCCC1Q96RQ3 725 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-209ENST00000397036 SMYD2Q9NRG4 433 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 IKBKGQ9Y6K9 419 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms