RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 TRIP11Q15643 1979 aa15.29■□□□□ 0.04
MCF2L-205ENST00000397017 USP1O94782 785 aa15.29■□□□□ 0.04
MCF2L-205ENST00000397017 BPGMP07738 259 aa15.29■□□□□ 0.04
MCF2L-205ENST00000397017 POLR2EP19388 210 aaKnown RBP15.29■□□□□ 0.04
MCF2L-205ENST00000397017 NUDT2P50583 147 aa15.29■□□□□ 0.04
MCF2L-205ENST00000397017 TRIM71Q2Q1W2 868 aaKnown RBP15.29■□□□□ 0.04
MCF2L-205ENST00000397017 KYAT3Q6YP21 454 aaKnown RBP15.29■□□□□ 0.04
MCF2L-205ENST00000397017 RGS9BPQ6ZS82 235 aa15.29■□□□□ 0.04
MCF2L-205ENST00000397017 TMEM175Q9BSA9 504 aa15.29■□□□□ 0.04
MCF2L-205ENST00000397017 GOT2P00505 430 aaKnown RBP15.28■□□□□ 0.04
MCF2L-205ENST00000397017 MPOP05164 745 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 HMOX2P30519 316 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 PPIGQ13427 754 aaKnown RBP eCLIP15.28■□□□□ 0.046e-7■■■□□ 15.2
MCF2L-205ENST00000397017 SIRPB2Q5JXA9 342 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 MARK2Q7KZI7 788 aaKnown RBP15.28■□□□□ 0.04
MCF2L-205ENST00000397017 PIM3Q86V86 326 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 BBS7Q8IWZ6 715 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 PLD6Q8N2A8 252 aaKnown RBP15.28■□□□□ 0.04
MCF2L-205ENST00000397017 TRIOBPQ9H2D6 2365 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 MPSTP25325 297 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 SERPINA4P29622 427 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 HCAR3P49019 387 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 NDST2P52849 883 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 PEX6Q13608 980 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 KRT33BQ14525 404 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 RBBP5Q15291 538 aaKnown RBP15.28■□□□□ 0.04
MCF2L-205ENST00000397017 C6orf10Q5SRN2 563 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 CCSAPQ6IQ19 270 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-205ENST00000397017 CYB5D2Q8WUJ1 264 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 ZMYM5Q9UJ78 669 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 RGPD3A6NKT7 1758 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-205ENST00000397017 RGPD4Q7Z3J3 1758 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 INSIG1O15503 277 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 STC2O76061 302 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 NDST3O95803 873 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 NQO1P15559 274 aaKnown RBP15.28■□□□□ 0.04
MCF2L-205ENST00000397017 UGT1A6P19224 532 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 LPOP22079 712 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-205ENST00000397017 UGT1A1P22309 533 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 UGT1A4P22310 534 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 UGT1A3P35503 534 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 UGT1A5P35504 534 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 MAGEA11P43364 429 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 CCR10P46092 362 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 LIMK2P53671 638 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 IL10RBQ08334 325 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 PTPRRQ15256 657 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 TEAD2Q15562 447 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 GRAMD1BQ3KR37 738 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 LRRC49Q8IUZ0 686 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 ZNF317Q96PQ6 595 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-205ENST00000397017 SPATA16Q9BXB7 569 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 NMUR2Q9GZQ4 415 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 ELAC1Q9H777 363 aaKnown RBP15.28■□□□□ 0.04
MCF2L-205ENST00000397017 SLC28A3Q9HAS3 691 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 MID1IP1Q9NPA3 183 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 TCF7L2Q9NQB0 619 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 VPS45Q9NRW7 570 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 WWOXQ9NZC7 414 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 V9GYQ6 96 aa15.28■□□□□ 0.04
MCF2L-205ENST00000397017 PRPF4O43172 522 aaKnown RBP eCLIP15.27■□□□□ 0.042e-6■■■□□ 16.3
MCF2L-205ENST00000397017 PDE5AO76074 875 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 PRSS56P0CW18 603 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 FGFR3P22607 806 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 GRK2P25098 689 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 STK19P49842 368 aaPredicted RBP15.27■□□□□ 0.04
MCF2L-205ENST00000397017 SYTL3Q4VX76 610 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 RAB41Q5JT25 222 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 RPAINQ86UA6 219 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 TDRPQ86YL5 185 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 PTGR2Q8N8N7 351 aaPredicted RBP15.27■□□□□ 0.04
MCF2L-205ENST00000397017 USP13Q92995 863 aaPredicted RBP15.27■□□□□ 0.04
MCF2L-205ENST00000397017 ZFYVE19Q96K21 471 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 MAGEH1Q9H213 219 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 PIF1Q9H611 641 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 MTRRQ9UBK8 725 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 RAD54BQ9Y620 910 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 CCDC162PA2VCL2 907 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 TGM5O43548 720 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 ATP5HO75947 161 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 IL1BP01584 269 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 FGF1P05230 155 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 RGS4P49798 205 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 ABCE1P61221 599 aaKnown RBP15.27■□□□□ 0.04
MCF2L-205ENST00000397017 WDR5P61964 334 aaKnown RBP15.27■□□□□ 0.04
MCF2L-205ENST00000397017 NIPAL4Q0D2K0 466 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 LAMB3Q13751 1172 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 FNDC3BQ53EP0 1204 aaKnown RBP15.27■□□□□ 0.04
MCF2L-205ENST00000397017 TSTD2Q5T7W7 516 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 OTUD1Q5VV17 481 aaPredicted RBP15.27■□□□□ 0.04
MCF2L-205ENST00000397017 FBXO46Q6PJ61 603 aaPredicted RBP15.27■□□□□ 0.04
MCF2L-205ENST00000397017 SPATA24Q86W54 205 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 TRPC4APQ8TEL6 797 aa15.27■□□□□ 0.04
MCF2L-205ENST00000397017 RSRC1Q96IZ7 334 aaKnown RBP15.27■□□□□ 0.04
MCF2L-205ENST00000397017 EML4Q9HC35 981 aaKnown RBP15.27■□□□□ 0.04
MCF2L-205ENST00000397017 C9JVG2 144 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 AURKAO14965 403 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 INPP4BO15327 924 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 PLIN3O60664 434 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 HIST1H2AGP0C0S8 130 aaPredicted RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms