RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 SCINQ9Y6U3 715 aa4.27□□□□□ -1.73
CMC1-202ENST00000396610 GTPBP1O00178 669 aaKnown RBP4.26□□□□□ -1.73
CMC1-202ENST00000396610 KCNJ13O60928 360 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 SERPINI2O75830 405 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 SEC31AO94979 1220 aaKnown RBP4.26□□□□□ -1.73
CMC1-202ENST00000396610 MT-CYBP00156 380 aaPredicted RBP4.26□□□□□ -1.73
CMC1-202ENST00000396610 GLUD1P00367 558 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 TFP02787 698 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 PRSS2P07478 247 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 TNFRSF8P28908 595 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 CCKARP32238 428 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 GLUD2P49448 558 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 CTCFP49711 727 aaPredicted RBP4.26□□□□□ -1.73
CMC1-202ENST00000396610 PDLIM4P50479 330 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 NEXNQ0ZGT2 675 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 MMEL1Q495T6 779 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 HIST2H2BCQ6DN03 193 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 HIST2H2BDQ6DRA6 164 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 FBXO46Q6PJ61 603 aaPredicted RBP4.26□□□□□ -1.73
CMC1-202ENST00000396610 MEPCEQ7L2J0 689 aaKnown RBP4.26□□□□□ -1.73
CMC1-202ENST00000396610 SLC46A3Q7Z3Q1 461 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 CNTROBQ8N137 903 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 PCYOX1LQ8NBM8 494 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 FAM216AQ8WUB2 273 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 FBXL8Q96CD0 374 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 MED30Q96HR3 178 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 NR1H4Q96RI1 486 aaPredicted RBP4.26□□□□□ -1.73
CMC1-202ENST00000396610 TKTL2Q9H0I9 626 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 JMJD4Q9H9V9 463 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 PCDHB16Q9NRJ7 776 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 WNT16Q9UBV4 365 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 A4GNTQ9UNA3 340 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 SLC45A1Q9Y2W3 748 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 TMEM98Q9Y2Y6 226 aa4.26□□□□□ -1.73
CMC1-202ENST00000396610 KDM3AQ9Y4C1 1321 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 J3KRW8 73 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 NDUFB4O95168 129 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 VNN2O95498 520 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 AGAP20933 346 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 PAX3P23760 479 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 CHATP28329 748 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 ARL1P40616 181 aaPredicted RBP4.25□□□□□ -1.73
CMC1-202ENST00000396610 CASP6P55212 293 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 POU5F1BQ06416 359 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 ITGADQ13349 1161 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 HLFQ16534 295 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 HIST2H2ACQ16777 129 aaPredicted RBP4.25□□□□□ -1.73
CMC1-202ENST00000396610 TCTN1Q2MV58 587 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 ALG11Q2TAA5 492 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 CCDC70Q6NSX1 233 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 QSOX2Q6ZRP7 698 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 CLIP4Q8N3C7 705 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 ADAMTS15Q8TE58 950 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 PIP5K1AQ99755 562 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 SLC25A33Q9BSK2 321 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 SLC26A6Q9BXS9 759 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 MAGEE1Q9HCI5 957 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 BPIFA1Q9NP55 256 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 OCIAD1Q9NX40 245 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 MKLN1Q9UL63 735 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 PAM16Q9Y3D7 125 aa4.25□□□□□ -1.73
CMC1-202ENST00000396610 LSM4Q9Y4Z0 139 aaKnown RBP4.25□□□□□ -1.73
CMC1-202ENST00000396610 HSPA12AO43301 675 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 SLC28A2O43868 658 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 PAPSS2O95340 614 aaPredicted RBP4.24□□□□□ -1.73
CMC1-202ENST00000396610 TBX18O95935 607 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 IRF1P10914 325 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 FCGR1AP12314 374 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 ZNF12P17014 697 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 TKTP29401 623 aaKnown RBP4.24□□□□□ -1.73
CMC1-202ENST00000396610 SHMT1P34896 483 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 KRT9P35527 623 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 COMPP49747 757 aaPredicted RBP4.24□□□□□ -1.73
CMC1-202ENST00000396610 TBX2Q13207 712 aaPredicted RBP4.24□□□□□ -1.73
CMC1-202ENST00000396610 EFNB3Q15768 340 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 TSTQ16762 297 aaKnown RBP4.24□□□□□ -1.73
CMC1-202ENST00000396610 SGO1Q5FBB7 561 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 EFHC1Q5JVL4 640 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 KIAA1161Q6NSJ0 714 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 PDXDC1Q6P996 788 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 INO80CQ6PI98 192 aaPredicted RBP4.24□□□□□ -1.73
CMC1-202ENST00000396610 R3HCC1LQ7Z5L2 792 aaKnown RBP4.24□□□□□ -1.73
CMC1-202ENST00000396610 ZCCHC9Q8N567 271 aaKnown RBP4.24□□□□□ -1.73
CMC1-202ENST00000396610 METTL6Q8TCB7 284 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 SAAL1Q96ER3 474 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 FIZ1Q96SL8 496 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 H2AFJQ9BTM1 129 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 PLEKHA4Q9H4M7 779 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 BRF2Q9HAW0 419 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 NOX4Q9NPH5 578 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 TAS2R10Q9NYW0 307 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 CDC14AQ9UNH5 594 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 NFE2L3Q9Y4A8 694 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 CAPN7Q9Y6W3 813 aa4.24□□□□□ -1.73
CMC1-202ENST00000396610 IGLV5-52A0A0A0MRZ9 124 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 A0A1W2PPH5 198 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 NPIPB15A6NHN6 443 aaPredicted RBP4.23□□□□□ -1.73
CMC1-202ENST00000396610 TAF4O00268 1085 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 WNT9BO14905 357 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 TGFB1I1O43294 461 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms