RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 VAV1P15498 845 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 SPAM1P38567 509 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 PKNOX1P55347 436 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 DLG4P78352 724 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 KIF2BQ8N4N8 673 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 PTGR2Q8N8N7 351 aaPredicted RBP15.71■□□□□ 0.11
GNE-202ENST00000396594 MYDGFQ969H8 173 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 SAMD11Q96NU1 681 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 NUSAP1Q9BXS6 441 aaKnown RBP15.71■□□□□ 0.11
GNE-202ENST00000396594 EXD2Q9NVH0 621 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 CALML5Q9NZT1 146 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 ATP6V1HQ9UI12 483 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 COQ4Q9Y3A0 265 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.71■□□□□ 0.11
GNE-202ENST00000396594 ITGA2BP08514 1039 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 PTPN2P17706 415 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 CASP5P51878 434 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 XYLT1Q86Y38 959 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 DENND1CQ8IV53 801 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 OR6Y1Q8NGX8 325 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 C11orf84Q9BUA3 381 aaPredicted RBP15.71■□□□□ 0.11
GNE-202ENST00000396594 UBP1Q9NZI7 540 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 GSTM1P09488 218 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 CRHR1P34998 444 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 GAD2Q05329 585 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 MBTD1Q05BQ5 628 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 PTGES3Q15185 160 aaKnown RBP15.71■□□□□ 0.11
GNE-202ENST00000396594 AP5B1Q2VPB7 878 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 CCDC92Q53HC0 331 aaPredicted RBP15.71■□□□□ 0.11
GNE-202ENST00000396594 RORBQ92753 470 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 PHF21BQ96EK2 531 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 SPACA7Q96KW9 195 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 DEC1Q9P2X7 70 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 PRKAG3Q9UGI9 489 aa15.71■□□□□ 0.11
GNE-202ENST00000396594 PRMT5O14744 637 aaPredicted RBP15.71■□□□□ 0.1
GNE-202ENST00000396594 SLC16A1P53985 500 aa15.71■□□□□ 0.1
GNE-202ENST00000396594 C2CD6Q53TS8 623 aa15.71■□□□□ 0.1
GNE-202ENST00000396594 ATAT1Q5SQI0 421 aa15.71■□□□□ 0.1
GNE-202ENST00000396594 CROCCP3Q8IVE0 287 aa15.71■□□□□ 0.1
GNE-202ENST00000396594 PRELID2Q8N945 189 aa15.71■□□□□ 0.1
GNE-202ENST00000396594 RHOBTB2Q9BYZ6 727 aa15.71■□□□□ 0.1
GNE-202ENST00000396594 SESN1Q9Y6P5 492 aa15.71■□□□□ 0.1
GNE-202ENST00000396594 TPH1P17752 444 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 ALDH9A1P49189 494 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 FOXD4Q12950 439 aaPredicted RBP15.7■□□□□ 0.1
GNE-202ENST00000396594 MON1BQ7L1V2 547 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 FCRL2Q96LA5 508 aaPredicted RBP15.7■□□□□ 0.1
GNE-202ENST00000396594 PNPLA8Q9NP80 782 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 INTS10Q9NVR2 710 aaKnown RBP15.7■□□□□ 0.1
GNE-202ENST00000396594 CRNNQ9UBG3 495 aaPredicted RBP15.7■□□□□ 0.1
GNE-202ENST00000396594 VWA7Q9Y334 891 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 PRR23AA6NEV1 266 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 AZIN1O14977 448 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 SERPINI2O75830 405 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 ATP6V1G2O95670 118 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 CCDC166P0CW27 439 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 CPA2P48052 419 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 C21orf59P57076 290 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 RAB14P61106 215 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 UNC5AQ6ZN44 842 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 LRP10Q7Z4F1 713 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 PIK3C3Q8NEB9 887 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 LIMD1Q9UGP4 676 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 ACSL4O60488 711 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 POP4O95707 220 aaKnown RBP15.7■□□□□ 0.1
GNE-202ENST00000396594 ELFN1P0C7U0 828 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 LRPAP1P30533 357 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 NDUFV1P49821 464 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 CBX2Q14781 532 aaPredicted RBP15.7■□□□□ 0.1
GNE-202ENST00000396594 ZNF276Q8N554 614 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 C19orf18Q8NEA5 215 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 FIG4Q92562 907 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 HAPLN3Q96S86 360 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 BRD9Q9H8M2 597 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 GGT7Q9UJ14 662 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 SCAF8Q9UPN6 1271 aaKnown RBP15.7■□□□□ 0.1
GNE-202ENST00000396594 C1orf232A0A0U1RR37 186 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 E2F8A0AVK6 867 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 CLOCKO15516 846 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 PAGE1O75459 146 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 JAM2P57087 298 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 AUHQ13825 339 aaKnown RBP15.7■□□□□ 0.1
GNE-202ENST00000396594 ACE2Q9BYF1 805 aaPredicted RBP15.7■□□□□ 0.1
GNE-202ENST00000396594 FZD8Q9H461 694 aa15.7■□□□□ 0.1
GNE-202ENST00000396594 THUMPD1Q9NXG2 353 aaKnown RBP15.7■□□□□ 0.1
GNE-202ENST00000396594 MGRN1O60291 552 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 NOS3P29474 1203 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 RPS6KA3P51812 740 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 UBE3AQ05086 875 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 INAQ16352 499 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 TRIM16LQ309B1 348 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 C16orf62Q7Z3J2 963 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 SNX32Q86XE0 403 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 C8orf59Q8N0T1 100 aaPredicted RBP15.69■□□□□ 0.1
GNE-202ENST00000396594 OVCA2Q8WZ82 227 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 COPS5Q92905 334 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 BHMTQ93088 406 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 HIC2Q96JB3 615 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 RNPEPQ9H4A4 650 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 ADGRE2Q9UHX3 823 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms