RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 SEMA3CQ99985 751 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 MFSD1Q9H3U5 465 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 ELAC1Q9H777 363 aaKnown RBP16.66■□□□□ 0.26
TRIM39-205ENST00000396551 PCDHB7Q9Y5E2 793 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 SLC7A4O43246 635 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 S1PR4O95977 384 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 SELPP16109 830 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 TACR2P21452 398 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 ATP5F1P24539 256 aaPredicted RBP16.66■□□□□ 0.26
TRIM39-205ENST00000396551 DNAJB13P59910 316 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 AP2B1P63010 937 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 TBL3Q12788 808 aaKnown RBP16.66■□□□□ 0.26
TRIM39-205ENST00000396551 TMEM207Q6UWW9 146 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 TRIM67Q6ZTA4 783 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 HPS6Q86YV9 775 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 CPSF7Q8N684 471 aaKnown RBP16.66■□□□□ 0.26
TRIM39-205ENST00000396551 STON2Q8WXE9 905 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 CATSPER2Q96P56 530 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 TTC1Q99614 292 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 ACTL7AQ9Y615 435 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 TLR5O60602 858 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 PRAMEF11O60813 436 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 WISP3O95389 354 aaPredicted RBP16.66■□□□□ 0.26
TRIM39-205ENST00000396551 ALDH2P05091 517 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 ATF6P18850 670 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 PTPRCAPQ14761 206 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 SNX32Q86XE0 403 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 CFAP52Q8N1V2 620 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 OR6P1Q8NGX9 317 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 BCL7CQ8WUZ0 217 aaPredicted RBP16.66■□□□□ 0.26
TRIM39-205ENST00000396551 HHIPL1Q96JK4 782 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 PDFQ9HBH1 243 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 CYP4F12Q9HCS2 524 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 CDYLQ9Y232 598 aa16.66■□□□□ 0.26
TRIM39-205ENST00000396551 SLCO1B7G3V0H7 640 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 ARVCFO00192 962 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 FKBP6O75344 327 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 CCDC166P0CW27 439 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 HNRNPLP14866 589 aaKnown RBP eCLIP16.65■□□□□ 0.26
TRIM39-205ENST00000396551 CDKN2DP55273 166 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 RNF111Q6ZNA4 994 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 ACAD11Q709F0 780 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 RPS27LQ71UM5 84 aaKnown RBP16.65■□□□□ 0.26
TRIM39-205ENST00000396551 GALNT7Q86SF2 657 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 CCDC124Q96CT7 223 aaKnown RBP16.65■□□□□ 0.26
TRIM39-205ENST00000396551 MARK4Q96L34 752 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 UBXN10Q96LJ8 280 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 CCDC28BQ9BUN5 200 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 SUDS3Q9H7L9 328 aaPredicted RBP16.65■□□□□ 0.26
TRIM39-205ENST00000396551 S100A14Q9HCY8 104 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 TNFRSF12AQ9NP84 129 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 POMPQ9Y244 141 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 A8MT66 165 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 LTA4HP09960 611 aaKnown RBP16.65■□□□□ 0.26
TRIM39-205ENST00000396551 SLC6A4P31645 630 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 MAPKAPK2P49137 400 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 KPNA2P52292 529 aaKnown RBP16.65■□□□□ 0.26
TRIM39-205ENST00000396551 YBEYP58557 167 aaPredicted RBP16.65■□□□□ 0.26
TRIM39-205ENST00000396551 ASPHQ12797 758 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 FAM83EQ2M2I3 478 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 PRSS55Q6UWB4 352 aaPredicted RBP16.65■□□□□ 0.26
TRIM39-205ENST00000396551 PIWIL4Q7Z3Z4 852 aaKnown RBP16.65■□□□□ 0.26
TRIM39-205ENST00000396551 OR52K2Q8NGK3 314 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 PYDC1Q8WXC3 89 aa16.65■□□□□ 0.26
TRIM39-205ENST00000396551 BUD23O43709 281 aaKnown RBP16.64■□□□□ 0.26
TRIM39-205ENST00000396551 PDHA1P08559 390 aa16.64■□□□□ 0.26
TRIM39-205ENST00000396551 TCHHL1Q5QJ38 904 aaPredicted RBP16.64■□□□□ 0.26
TRIM39-205ENST00000396551 SH2D4BQ5SQS7 431 aa16.64■□□□□ 0.26
TRIM39-205ENST00000396551 AAGABQ6PD74 315 aa16.64■□□□□ 0.26
TRIM39-205ENST00000396551 LGI2Q8N0V4 545 aa16.64■□□□□ 0.26
TRIM39-205ENST00000396551 FBXW8Q8N3Y1 598 aa16.64■□□□□ 0.26
TRIM39-205ENST00000396551 TBATAQ96M53 351 aa16.64■□□□□ 0.26
TRIM39-205ENST00000396551 NCKIPSDQ9NZQ3 722 aa16.64■□□□□ 0.26
TRIM39-205ENST00000396551 A0A0D9SEW6 157 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 SLC38A8A6NNN8 435 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 SDHDO14521 159 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 LIN7AO14910 233 aaPredicted RBP16.64■□□□□ 0.25
TRIM39-205ENST00000396551 PPARGP37231 505 aaPredicted RBP16.64■□□□□ 0.25
TRIM39-205ENST00000396551 MTTPP55157 894 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 AGAP9Q5VTM2 703 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 NXNQ6DKJ4 435 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 PPFIBP2Q8ND30 876 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 MIEF2Q96C03 454 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 MAELQ96JY0 434 aaKnown RBP16.64■□□□□ 0.25
TRIM39-205ENST00000396551 POLR1EQ9GZS1 481 aaKnown RBP16.64■□□□□ 0.25
TRIM39-205ENST00000396551 NDE1Q9NXR1 346 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 VWA7Q9Y334 891 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 ARL5AQ9Y689 179 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 SCN5AQ14524 2016 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 RGSL1A5PLK6 1076 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 AIM2O14862 343 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 ADAM12O43184 909 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 MAP3K7O43318 606 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 SMNDC1O75940 238 aaKnown RBP eCLIP16.64■□□□□ 0.25
TRIM39-205ENST00000396551 BAG2O95816 211 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 THRAP10827 490 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 PRAMEP78395 509 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 ACVR1Q04771 509 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 SULT2A1Q06520 285 aa16.64■□□□□ 0.25
TRIM39-205ENST00000396551 GALNT3Q14435 633 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms