RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 WDR92Q96MX6 357 aa16.51■□□□□ 0.23
DDR1-229ENST00000396342 GFM1Q96RP9 751 aaKnown RBP16.51■□□□□ 0.23
DDR1-229ENST00000396342 APOOQ9BUR5 198 aa16.51■□□□□ 0.23
DDR1-229ENST00000396342 LRRC61Q9BV99 259 aa16.51■□□□□ 0.23
DDR1-229ENST00000396342 BOCQ9BWV1 1114 aa16.51■□□□□ 0.23
DDR1-229ENST00000396342 EDEM3Q9BZQ6 932 aa16.51■□□□□ 0.23
DDR1-229ENST00000396342 AKAP7Q9P0M2 348 aaPredicted RBP16.51■□□□□ 0.23
DDR1-229ENST00000396342 SIRPGQ9P1W8 387 aa16.51■□□□□ 0.23
DDR1-229ENST00000396342 PCSK1NQ9UHG2 260 aa16.51■□□□□ 0.23
DDR1-229ENST00000396342 SATB2Q9UPW6 733 aa16.51■□□□□ 0.23
DDR1-229ENST00000396342 CCDC187A0A096LP49 1063 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.5■□□□□ 0.23
DDR1-229ENST00000396342 CFAP69A5D8W1 941 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 ZZEF1O43149 2961 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 SPINT1O43278 529 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 MYBL1P10243 752 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 TGM2P21980 687 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 LIG3P49916 1009 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 PAPOLAP51003 745 aaKnown RBP16.5■□□□□ 0.23
DDR1-229ENST00000396342 SRP54P61011 504 aaKnown RBP16.5■□□□□ 0.23
DDR1-229ENST00000396342 EIF3IQ13347 325 aaKnown RBP16.5■□□□□ 0.23
DDR1-229ENST00000396342 ZNF235Q14590 738 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 INPP5AQ14642 412 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 CYTH1Q15438 398 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 CRTC1Q6UUV9 634 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 RBM43Q6ZSC3 357 aaKnown RBP16.5■□□□□ 0.23
DDR1-229ENST00000396342 RFX8Q6ZV50 586 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 NDUFAF2Q8N183 169 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 AOPEPQ8N6M6 819 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 TP53I13Q8NBR0 393 aaPredicted RBP16.5■□□□□ 0.23
DDR1-229ENST00000396342 ATXN7L3BQ96GX2 97 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 CRELD1Q96HD1 420 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 CELF6Q96J87 481 aaKnown RBP16.5■□□□□ 0.23
DDR1-229ENST00000396342 TMEM74Q96NL1 305 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 CCDC3Q9BQI4 270 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 MAGEB5Q9BZ81 275 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 MBNL1Q9NR56 388 aaKnown RBP16.5■□□□□ 0.23
DDR1-229ENST00000396342 LHX3Q9UBR4 397 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 SEPT3Q9UH03 358 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 MOSPD1Q9UJG1 213 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 PCDHGA8Q9Y5G5 932 aa16.5■□□□□ 0.23
DDR1-229ENST00000396342 DSPP15924 2871 aaKnown RBP16.5■□□□□ 0.23
DDR1-229ENST00000396342 ASPMQ8IZT6 3477 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 H3BRJ5 948 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 GCATO75600 419 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 HSPA9P38646 679 aaKnown RBP16.49■□□□□ 0.23
DDR1-229ENST00000396342 SCNN1BP51168 640 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 AP1S1P61966 158 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 KLHL30Q0D2K2 578 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 MAMLD1Q13495 774 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 ARHGEF7Q14155 803 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 IGF2-ASQ6U949 168 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 TAF8Q7Z7C8 310 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 CAMK1DQ8IU85 385 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 SLC35F3Q8IY50 421 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 TSACCQ96A04 125 aaPredicted RBP16.49■□□□□ 0.23
DDR1-229ENST00000396342 NOL6Q9H6R4 1146 aaKnown RBP16.49■□□□□ 0.23
DDR1-229ENST00000396342 EPB41L5Q9HCM4 733 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 KLF15Q9UIH9 416 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 NEU3Q9UQ49 428 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 COQ6Q9Y2Z9 468 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 RAI2Q9Y5P3 530 aa16.49■□□□□ 0.23
DDR1-229ENST00000396342 TSPAN11A1L157 253 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 ERVH48-1M5A8F1 160 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 INSIG1O15503 277 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 TNFSF15O95150 251 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 ATP1A3P13637 1013 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 IL10RBQ08334 325 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 NSUN2Q08J23 767 aaKnown RBP eCLIP16.48■□□□□ 0.23
DDR1-229ENST00000396342 ACOX1Q15067 660 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 WSCD2Q2TBF2 565 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 PPP1R15BQ5SWA1 713 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 ARTNQ5T4W7 220 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 ARHGAP40Q5TG30 622 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 ZNF605Q86T29 641 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 JAMLQ86YT9 394 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 NETO2Q8NC67 525 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 OR56A4Q8NGH8 313 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 PCDH19Q8TAB3 1148 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 KIAA1524Q8TCG1 905 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 ZNF653Q96CK0 615 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 SLC46A1Q96NT5 459 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 KLC2Q9H0B6 622 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 LRRC19Q9H756 370 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 GPATCH2LQ9NWQ4 482 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 CNOT8Q9UFF9 292 aaKnown RBP16.48■□□□□ 0.23
DDR1-229ENST00000396342 OR1A2Q9Y585 309 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 DMXL2Q8TDJ6 3036 aa16.48■□□□□ 0.23
DDR1-229ENST00000396342 LY6G6EA0A0G2JKS1 128 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 J3KR12 359 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 SERPINC1P01008 464 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 FTLP02792 175 aaPredicted RBP16.47■□□□□ 0.23
DDR1-229ENST00000396342 JMJD7P0C870 316 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 GZMAP12544 262 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 ERCC2P18074 760 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 SERPINB6P35237 376 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 MMP12P39900 470 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 HCAR3P49019 387 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 TYRO3Q06418 890 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 VAC14Q08AM6 782 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms