RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ETFBP38117 255 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 ARSDP51689 593 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 KCNQ1P51787 676 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 ZNF235Q14590 738 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 SLC8B1Q6J4K2 584 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 KLC3Q6P597 504 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 AAGABQ6PD74 315 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 FRMD7Q6ZUT3 714 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 TMEM173Q86WV6 379 aaPredicted RBP16.88■□□□□ 0.29
NUP50-202ENST00000396096 LGI2Q8N0V4 545 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 SPATA6LQ8N4H0 392 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 PDZD8Q8NEN9 1154 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 AGR3Q8TD06 166 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 GIPC2Q8TF65 315 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 BCL7CQ8WUZ0 217 aaPredicted RBP16.88■□□□□ 0.29
NUP50-202ENST00000396096 HDAC10Q969S8 669 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 NDNQ99608 321 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 CREBZFQ9NS37 354 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 NMRK1Q9NWW6 199 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 CORO1CQ9ULV4 474 aaPredicted RBP16.88■□□□□ 0.29
NUP50-202ENST00000396096 CDYLQ9Y232 598 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 VWA7Q9Y334 891 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 TET1Q8NFU7 2136 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 TANC1Q9C0D5 1861 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.88■□□□□ 0.29
NUP50-202ENST00000396096 TTC24A2A3L6 582 aaPredicted RBP16.88■□□□□ 0.29
NUP50-202ENST00000396096 THRAP10827 490 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 HOXB8P17481 243 aaPredicted RBP16.88■□□□□ 0.29
NUP50-202ENST00000396096 HOXD9P28356 352 aaPredicted RBP16.88■□□□□ 0.29
NUP50-202ENST00000396096 SLC6A4P31645 630 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 ATP5C1P36542 298 aaKnown RBP16.88■□□□□ 0.29
NUP50-202ENST00000396096 CENPFP49454 3210 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 CLNS1AP54105 237 aaKnown RBP16.88■□□□□ 0.29
NUP50-202ENST00000396096 PRAMEP78395 509 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 CSHL1Q14406 222 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 HERC3Q15034 1050 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 ACAP2Q15057 778 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 RALGPS1Q5JS13 557 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 KLHDC10Q6PID8 442 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 TRIM67Q6ZTA4 783 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 PTAR1Q7Z6K3 402 aaPredicted RBP16.88■□□□□ 0.29
NUP50-202ENST00000396096 SETD3Q86TU7 594 aaPredicted RBP16.88■□□□□ 0.29
NUP50-202ENST00000396096 FBXO22Q8NEZ5 403 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 IFT43Q96FT9 208 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 MAELQ96JY0 434 aaKnown RBP16.88■□□□□ 0.29
NUP50-202ENST00000396096 POMKQ9H5K3 350 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 WDR55Q9H6Y2 383 aaPredicted RBP16.88■□□□□ 0.29
NUP50-202ENST00000396096 MTRRQ9UBK8 725 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 SSX2IPQ9Y2D8 614 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 TBKBP1A7MCY6 615 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 NT5C1B-RDH14C9J2C7 533 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 LIN7AO14910 233 aaPredicted RBP16.87■□□□□ 0.29
NUP50-202ENST00000396096 TRPA1O75762 1119 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 PENKP01210 267 aaPredicted RBP16.87■□□□□ 0.29
NUP50-202ENST00000396096 PIK3R1P27986 724 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 CDH4P55283 916 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 AP2B1P63010 937 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 SATB1Q01826 763 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 GNA12Q03113 381 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 FAM45BPQ6NSW5 357 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 PRSS55Q6UWB4 352 aaPredicted RBP16.87■□□□□ 0.29
NUP50-202ENST00000396096 ADGRG6Q86SQ4 1221 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 OR6P1Q8NGX9 317 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 FAM45AQ8TCE6 357 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 DTX3LQ8TDB6 740 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 LENG8Q96PV6 779 aaPredicted RBP16.87■□□□□ 0.29
NUP50-202ENST00000396096 TRIB3Q96RU7 358 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 MGME1Q9BQP7 344 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 NUF2Q9BZD4 464 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 ACSS2Q9NR19 701 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 MARCH4Q9P2E8 410 aaPredicted RBP16.87■□□□□ 0.29
NUP50-202ENST00000396096 CDH22Q9UJ99 828 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 BACE2Q9Y5Z0 518 aa16.87■□□□□ 0.29
NUP50-202ENST00000396096 GOLGA8QA0A0J9YX86 632 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 RGSL1A5PLK6 1076 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 GOLGA8OA6NCC3 632 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 TRPC5OSA6NMA1 111 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 A8MT66 165 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 GOLGA8NF8WBI6 632 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 H3BNC9 293 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 CCDC166P0CW27 439 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 ANPEPP15144 967 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 EPHA3P29320 983 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 PPARGP37231 505 aaPredicted RBP16.86■□□□□ 0.29
NUP50-202ENST00000396096 TUFMP49411 452 aaKnown RBP16.86■□□□□ 0.29
NUP50-202ENST00000396096 SESN3P58005 492 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 GALNT1Q10472 559 aaPredicted RBP16.86■□□□□ 0.29
NUP50-202ENST00000396096 CUL3Q13618 768 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 ZRSR2Q15696 482 aaKnown RBP16.86■□□□□ 0.29
NUP50-202ENST00000396096 MUM1Q2TAK8 710 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 LRRC43Q8N309 656 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 BBS5Q8N3I7 341 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 CCNYL1Q8N7R7 359 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 RP9Q8TA86 221 aaKnown RBP16.86■□□□□ 0.29
NUP50-202ENST00000396096 BRSK1Q8TDC3 778 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 FAR2Q96K12 515 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.86■□□□□ 0.29
NUP50-202ENST00000396096 KCTD3Q9Y597 815 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 WASF2Q9Y6W5 498 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 LOC100653049A0A140TA62 436 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms