RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ACTL7AQ9Y615 435 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 IGLV3-10A0A075B6K4 115 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 HTR1BP28222 390 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 CSTF2P33240 577 aaKnown RBP eCLIP13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 ACADSBP45954 432 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 GPR3P46089 330 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 MAZP56270 477 aaKnown RBP13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 MTA1Q13330 715 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 MAP7Q14244 749 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 LRRC14Q15048 493 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 INPP5JQ15735 1006 aaPredicted RBP13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 PRR30Q53SZ7 412 aaPredicted RBP13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 OTUD1Q5VV17 481 aaPredicted RBP13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 RETSATQ6NUM9 610 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 TAF8Q7Z7C8 310 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 Q8NA96 180 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 TMEM168Q9H0V1 697 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 THAP9Q9H5L6 903 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 FGF22Q9HCT0 170 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 EXOC1Q9NV70 894 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 DDIT4Q9NX09 232 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 OR1A2Q9Y585 309 aa13.79□□□□□ -0.2
VCPKMT-201ENST00000395859 ANKRD36A6QL64 1941 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 DIDO1Q9BTC0 2240 aaKnown RBP13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 ILVBLA1L0T0 632 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 TMEM202A6NGA9 273 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 E5RJQ4 531 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 HNRNPRO43390 633 aaKnown RBP13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 CUTAO60888 179 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 ALDH4A1P30038 563 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 COPB1P53618 953 aaKnown RBP13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 MC2RQ01718 297 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 ADAM9Q13443 819 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 INPP5AQ14642 412 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 TMEM52BQ4KMG9 183 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 LRRC73Q5JTD7 316 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 PAPD7Q5XG87 772 aaKnown RBP13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 ZNF783Q6ZMS7 281 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 NRROSQ86YC3 692 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 OR6K2Q8NGY2 324 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 PRR7Q8TB68 274 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 PDCD6IPQ8WUM4 868 aaKnown RBP13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 MARVELD3Q96A59 401 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 INTS2Q9H0H0 1204 aaKnown RBP13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 TRIT1Q9H3H1 467 aaKnown RBP13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 DPEP2Q9H4A9 486 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 FAM204AQ9H8W3 233 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 MRPL40Q9NQ50 206 aaKnown RBP13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 FBXO8Q9NRD0 319 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 SPATS2LQ9NUQ6 558 aaKnown RBP13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 FAM13BQ9NYF5 915 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 ENTPD4Q9Y227 616 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 POLHQ9Y253 713 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 CROCCQ5TZA2 2017 aa13.78□□□□□ -0.2
VCPKMT-201ENST00000395859 IGHV1OR21-1A0A087WYE8 117 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 STK17BO94768 372 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 FGF1P05230 155 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 UGT2B4P06133 528 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 SYT1P21579 422 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 TBXAS1P24557 533 aaPredicted RBP13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 KIAA1024LP59773 190 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 CDK17Q00537 523 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 STK38Q15208 465 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 MEA1Q16626 185 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 NKAIN2Q5VXU1 208 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 ARHGAP22Q7Z5H3 698 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 TMEM135Q86UB9 458 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 ANKHD1Q8IWZ3 2542 aaKnown RBP13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 DEFB106AQ8N104 65 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 ATL2Q8NHH9 583 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 CXorf40AQ8TE69 158 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 INTS4Q96HW7 963 aaKnown RBP13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 KLHL32Q96NJ5 620 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 ZPBPQ9BS86 351 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 TRIM55Q9BYV6 548 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 TM6SF2Q9BZW4 377 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 UNKQ9C0B0 810 aaKnown RBP13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 ST7Q9NRC1 585 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 ARHGEF38Q9NXL2 777 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 SLC5A6Q9Y289 635 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 COQ6Q9Y2Z9 468 aa13.77□□□□□ -0.21
VCPKMT-201ENST00000395859 TNFRSF10CO14798 259 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 ACTN4O43707 911 aaKnown RBP13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 STX10O60499 249 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 DNAJB5O75953 348 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 ADCY5O95622 1261 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 RECKO95980 971 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 GSRP00390 522 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 HOXC4P09017 264 aaPredicted RBP13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 MPSTP25325 297 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 RPL13P26373 211 aaKnown RBP13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 DNA2P51530 1060 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 MTM1Q13496 603 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 SEMA5AQ13591 1074 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 CUL4AQ13619 759 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 DENND1BQ6P3S1 775 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 TMEM71Q6P5X7 295 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 TFAP2DQ7Z6R9 452 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 TTC7BQ86TV6 843 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms