RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 SPOCD1Q6ZMY3 1216 aa13.46□□□□□ -0.25
HLA-DMA-202ENST00000395303 DAAM2Q86T65 1068 aa13.46□□□□□ -0.25
HLA-DMA-202ENST00000395303 RCOR2Q8IZ40 523 aa13.46□□□□□ -0.25
HLA-DMA-202ENST00000395303 OXR1Q8N573 874 aa13.46□□□□□ -0.25
HLA-DMA-202ENST00000395303 LRRC57Q8N9N7 239 aa13.46□□□□□ -0.25
HLA-DMA-202ENST00000395303 RNF25Q96BH1 459 aaPredicted RBP13.46□□□□□ -0.25
HLA-DMA-202ENST00000395303 CENPTQ96BT3 561 aa13.46□□□□□ -0.25
HLA-DMA-202ENST00000395303 KLHDC7BQ96G42 594 aa13.46□□□□□ -0.25
HLA-DMA-202ENST00000395303 ELF4Q99607 663 aaPredicted RBP13.46□□□□□ -0.25
HLA-DMA-202ENST00000395303 IL12RB2Q99665 862 aa13.46□□□□□ -0.25
HLA-DMA-202ENST00000395303 NOD2Q9HC29 1040 aa13.46□□□□□ -0.25
HLA-DMA-202ENST00000395303 PCDH12Q9NPG4 1184 aa13.46□□□□□ -0.25
HLA-DMA-202ENST00000395303 CA5BQ9Y2D0 317 aa13.46□□□□□ -0.25
HLA-DMA-202ENST00000395303 ATP8A1Q9Y2Q0 1164 aa13.46□□□□□ -0.25
HLA-DMA-202ENST00000395303 CACNA1GO43497 2377 aa13.46□□□□□ -0.25
HLA-DMA-202ENST00000395303 NBEAQ8NFP9 2946 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 hCG_1818297A0A087WSY0 165 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 NEMP1O14524 444 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 APOL1O14791 398 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 CBFA2T3O75081 653 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 TM7SF2O76062 418 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 ZRANB2O95218 330 aaKnown RBP eCLIP13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 MAP3K6O95382 1288 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 PAK4O96013 591 aaPredicted RBP13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 CCNB1P14635 433 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 SPINK2P20155 84 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 XPAP23025 273 aaPredicted RBP13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 CTNNA2P26232 953 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 CTNNA1P35221 906 aaKnown RBP13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 MMP12P39900 470 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 MARCKSL1P49006 195 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 MAXP61244 160 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 IFI35P80217 286 aaPredicted RBP13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 FOXC1Q12948 553 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 TFDP2Q14188 446 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 SHBQ15464 509 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 PPP2R5EQ16537 467 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 TFDP3Q5H9I0 405 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 LRRC73Q5JTD7 316 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 KANSL1Q7Z3B3 1105 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 RFX6Q8HWS3 928 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 DCP2Q8IU60 420 aaKnown RBP13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 CCDC13Q8IYE1 715 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 TXLNBQ8N3L3 684 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 DEFB124Q8NES8 71 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 EXD1Q8NHP7 514 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 BAHD1Q8TBE0 780 aaPredicted RBP13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 CXorf40AQ8TE69 158 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 KRT35Q92764 455 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 ZNF830Q96NB3 372 aaPredicted RBP13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 MAK16Q9BXY0 300 aaKnown RBP13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 POLR1EQ9GZS1 481 aaKnown RBP13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 BRD8Q9H0E9 1235 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 SLC32A1Q9H598 525 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 NT5MQ9NPB1 228 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 FZD3Q9NPG1 666 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 SCUBE2Q9NQ36 999 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 GDF3Q9NR23 364 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 PPIL1Q9Y3C6 166 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 PCDHA3Q9Y5H8 950 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 SCN8AQ9UQD0 1980 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 PLXNB3Q9ULL4 1909 aa13.45□□□□□ -0.26
HLA-DMA-202ENST00000395303 ATRXP46100 2492 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 TTC24A2A3L6 582 aaPredicted RBP13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 GRID2IPA4D2P6 1211 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 POM121BA6NF01 834 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 A6NNZ2 444 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 KCNK3O14649 394 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 FLRT2O43155 660 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 SH3BP5O60239 455 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 FZD6O60353 706 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 THEGLP0DJG4 465 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 TNNT1P13805 278 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 NR2C2P49116 596 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 COPS2P61201 443 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 POLR2LP62875 67 aaKnown RBP13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 TRAF2Q12933 501 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 RALGDSQ12967 914 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 SGCGQ13326 291 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 IHHQ14623 411 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 PDK1Q15118 436 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 ODF2Q5BJF6 829 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 CFAP58Q5T655 872 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 NPNTQ6UXI9 565 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 DPPA4Q7L190 304 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 BZW1Q7L1Q6 419 aaKnown RBP13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 GLRX5Q86SX6 157 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 KIAA1328Q86T90 577 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 NAXDQ8IW45 347 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 KDF1Q8NAX2 398 aaPredicted RBP13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 TP53I13Q8NBR0 393 aaPredicted RBP13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 OR13H1Q8NG92 308 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 ARRDC2Q8TBH0 407 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 KIAA1524Q8TCG1 905 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 GATA6Q92908 595 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 IFT43Q96FT9 208 aa13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 RBM41Q96IZ5 413 aaKnown RBP13.44□□□□□ -0.26
HLA-DMA-202ENST00000395303 LGMNQ99538 433 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms