RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 CMC1Q7Z7K0 106 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 CUZD1Q86UP6 607 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 LPGAT1Q92604 370 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 REXO5Q96IC2 774 aaKnown RBP17.3■□□□□ 0.36
SIN3A-203ENST00000394949 PCDH18Q9HCL0 1135 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 ING3Q9NXR8 418 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 TIMM13Q9Y5L4 95 aaPredicted RBP17.3■□□□□ 0.36
SIN3A-203ENST00000394949 C2orf71A6NGG8 1288 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 CLDN25C9JDP6 229 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 SLC28A1O00337 649 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 HAT1O14929 419 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 COL5A2P05997 1499 aaPredicted RBP17.3■□□□□ 0.36
SIN3A-203ENST00000394949 FGFR1P11362 822 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 COX7A2P14406 83 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 PTPRAP18433 802 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 OR1E1P30953 314 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 PSEN1P49768 467 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 ADGRE1Q14246 886 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 TMEM86AQ8N2M4 240 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 MOV10Q9HCE1 1003 aaKnown RBP17.3■□□□□ 0.36
SIN3A-203ENST00000394949 TRPC4Q9UBN4 977 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 SNX6Q9UNH7 406 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 POMPQ9Y244 141 aa17.3■□□□□ 0.36
SIN3A-203ENST00000394949 HNRNPLP14866 589 aaKnown RBP eCLIP17.29■□□□□ 0.36
SIN3A-203ENST00000394949 MPSTP25325 297 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 FOXN2P32314 431 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 FEN1P39748 380 aaKnown RBP17.29■□□□□ 0.36
SIN3A-203ENST00000394949 AIF1P55008 147 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 RFWD3Q6PCD5 774 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 AHI1Q8N157 1196 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 CENPNQ96H22 339 aaPredicted RBP17.29■□□□□ 0.36
SIN3A-203ENST00000394949 ULBP1Q9BZM6 244 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 RCOR3Q9P2K3 495 aaPredicted RBP17.29■□□□□ 0.36
SIN3A-203ENST00000394949 EGFL7Q9UHF1 273 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 SLC22A3O75751 556 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 TSPAN9O75954 239 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 AKAP5P24588 427 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 FNBP1LQ5T0N5 605 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 LRRC17Q8N6Y2 441 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 MAGEB10Q96LZ2 347 aaPredicted RBP17.29■□□□□ 0.36
SIN3A-203ENST00000394949 TUBGCP5Q96RT8 1024 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 CIPCQ9C0C6 399 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 TMEM165Q9HC07 324 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 KLQ9UEF7 1012 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 A0A0J9YYE9 177 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 OR56A5P0C7T3 313 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 ZC3H12AQ5D1E8 599 aaKnown RBP17.29■□□□□ 0.36
SIN3A-203ENST00000394949 GCNT7Q6ZNI0 430 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 PAGE2Q7Z2X7 111 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 TFAP2DQ7Z6R9 452 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 RIOX2Q8IUF8 465 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 HM13Q8TCT9 377 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 TRAPPC12Q8WVT3 735 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 ARMC7Q9H6L4 198 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 ATP6V1HQ9UI12 483 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 EME2A4GXA9 379 aaPredicted RBP17.29■□□□□ 0.36
SIN3A-203ENST00000394949 ENDOD1O94919 500 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 YWHAQP27348 245 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 GRK3P35626 688 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 STX4Q12846 297 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 GALNT18Q6P9A2 607 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 COQ6Q9Y2Z9 468 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 TRPV2Q9Y5S1 764 aa17.29■□□□□ 0.36
SIN3A-203ENST00000394949 PLIN3O60664 434 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 ATN1P54259 1190 aaPredicted RBP17.28■□□□□ 0.36
SIN3A-203ENST00000394949 ITGA7Q13683 1181 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 FASTKD3Q14CZ7 662 aaKnown RBP17.28■□□□□ 0.36
SIN3A-203ENST00000394949 GK5Q6ZS86 529 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 MINDY2Q8NBR6 621 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 ADAM32Q8TC27 787 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 LENG8Q96PV6 779 aaPredicted RBP17.28■□□□□ 0.36
SIN3A-203ENST00000394949 FGFBP2Q9BYJ0 223 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 ZNF221Q9UK13 617 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 TMEM59LQ9UK28 342 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 DNAJA2O60884 412 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 CCNKO75909 580 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 SERPINA1P01009 418 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 ZNF37AP17032 561 aaPredicted RBP17.28■□□□□ 0.36
SIN3A-203ENST00000394949 TUFMP49411 452 aaKnown RBP17.28■□□□□ 0.36
SIN3A-203ENST00000394949 TYSND1Q2T9J0 566 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 ERAP2Q6P179 960 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 ZFPM1Q8IX07 1006 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 SELENOMQ8WWX9 145 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 LENG9Q96B70 501 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 GLIS2Q9BZE0 524 aaPredicted RBP17.28■□□□□ 0.36
SIN3A-203ENST00000394949 FAM50BQ9Y247 325 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 SNX8Q9Y5X2 465 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 ATP6V1G1O75348 118 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 ULK1O75385 1050 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 RPS9P46781 194 aaKnown RBP17.28■□□□□ 0.36
SIN3A-203ENST00000394949 CAPZA2P47755 286 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 SMIM11AP58511 58 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 SAMHD1Q9Y3Z3 626 aaKnown RBP17.28■□□□□ 0.36
SIN3A-203ENST00000394949 NR2E1Q9Y466 385 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 LRRC42Q9Y546 428 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 SMIM22K7EJ46 135 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 TBX10O75333 385 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 H6PDO95479 791 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 OTCP00480 354 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 TGM3Q08188 693 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms