RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ATP6V1E2Q96A05 226 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 B3GALT6Q96L58 329 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 CNBD2Q96M20 576 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 UROC1Q96N76 676 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 SPATA16Q9BXB7 569 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 NT5MQ9NPB1 228 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 ADA2Q9NZK5 511 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 PSMD13Q9UNM6 376 aa13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 NYNRINQ9P2P1 1898 aaKnown RBP13.58□□□□□ -0.24
GTF2F1-201ENST00000394456 E7ENX8 843 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 MATN3O15232 486 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 RNASEH2AO75792 299 aaKnown RBP13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 SOAT2O75908 522 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 CRTAMO95727 393 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 PIRTP0C851 137 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 PRSS56P0CW18 603 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 CCDC166P0CW27 439 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 CD151P48509 253 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 CDKN2DP55273 166 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 DSC2Q02487 901 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 SLC10A7Q0GE19 358 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 ART3Q13508 389 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 DEFB115Q30KQ5 88 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 PIK3R6Q5UE93 754 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 NEPROQ6NW34 567 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 CNTN4Q8IWV2 1026 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 CPSF7Q8N684 471 aaKnown RBP13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 C2CD4AQ8NCU7 369 aaPredicted RBP13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 ICA1LQ8NDH6 482 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 SREK1Q8WXA9 508 aaKnown RBP13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 CREBZFQ9NS37 354 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 TBC1D13Q9NVG8 400 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 ARHGEF38Q9NXL2 777 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 CCDC167Q9P0B6 97 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 ANKRD6Q9Y2G4 727 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 A8MT66 165 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 E9PAM4 449 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 FBP2O00757 339 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 ETFBP38117 255 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 CD86P42081 329 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 ALFQ53S48 1182 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 MANEALQ5VSG8 457 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 IL23RQ5VWK5 629 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 IYDQ6PHW0 289 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 RANBP10Q6VN20 620 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 CYHR1Q6ZMK1 362 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 LINC00523Q86TU6 105 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 SPATA24Q86W54 205 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 TTC9BQ8N6N2 239 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 LRCH3Q96II8 777 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 TRAPPC9Q96Q05 1148 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 TRIM8Q9BZR9 551 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 TRIM4Q9C037 500 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 MRPL46Q9H2W6 279 aaKnown RBP13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 TRPC7Q9HCX4 862 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 CLIC5Q9NZA1 410 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 HCSTQ9UBK5 93 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 IPO11Q9UI26 975 aaKnown RBP13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 AAR2Q9Y312 384 aaKnown RBP13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 ACTL7AQ9Y615 435 aa13.57□□□□□ -0.24
GTF2F1-201ENST00000394456 ACOT8O14734 319 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 SLC4A1P02730 911 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 GATMP50440 423 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 CDH13P55290 713 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 DDR2Q16832 855 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 LHX8Q68G74 356 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 CYP2R1Q6VVX0 501 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 SPPL2BQ8TCT7 592 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 IRGQQ8WZA9 623 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 PABPC5Q96DU9 382 aaKnown RBP13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 MYEOVQ96EZ4 313 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 PCDHB8Q9UN66 801 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 CRYL1Q9Y2S2 319 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 H2AFYO75367 372 aaKnown RBP13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 PEX11BO96011 259 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 ATP6V1B1P15313 513 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 HOXD10P28358 340 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 GRK4P32298 578 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 ADGRE1Q14246 886 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 MAPRE1Q15691 268 aaKnown RBP13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 NRF1Q16656 503 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 TECRLQ5HYJ1 363 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 GPR158Q5T848 1215 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 C16orf89Q6UX73 402 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 COLGALT2Q8IYK4 626 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 OR13J1Q8NGT2 312 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 RDH11Q8TC12 318 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 NMD3Q96D46 503 aaKnown RBP13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 HMCESQ96FZ2 354 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 C3orf30Q96M34 536 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 ALG9Q9H6U8 611 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 RRN3Q9NYV6 651 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 TBC1D30Q9Y2I9 924 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 PCDHGA7Q9Y5G6 932 aa13.56□□□□□ -0.24
GTF2F1-201ENST00000394456 MOXD2PA6NHM9 499 aa13.55□□□□□ -0.24
GTF2F1-201ENST00000394456 PEX1O43933 1283 aa13.55□□□□□ -0.24
GTF2F1-201ENST00000394456 ANXA9O76027 345 aa13.55□□□□□ -0.24
GTF2F1-201ENST00000394456 APOA4P06727 396 aa13.55□□□□□ -0.24
GTF2F1-201ENST00000394456 HMBSP08397 361 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms