RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 FZD2Q14332 565 aa30.95■■■□□ 2.55
CMTM4-202ENST00000394106 IFI16Q16666 785 aaKnown RBP30.95■■■□□ 2.55
CMTM4-202ENST00000394106 ODF2Q5BJF6 829 aa30.95■■■□□ 2.55
CMTM4-202ENST00000394106 TP53I13Q8NBR0 393 aaPredicted RBP30.95■■■□□ 2.55
CMTM4-202ENST00000394106 ADAMTS14Q8WXS8 1223 aa30.95■■■□□ 2.55
CMTM4-202ENST00000394106 MBNL1Q9NR56 388 aaKnown RBP30.95■■■□□ 2.55
CMTM4-202ENST00000394106 TFR2Q9UP52 801 aa30.95■■■□□ 2.55
CMTM4-202ENST00000394106 COL5A1P20908 1838 aaPredicted RBP30.95■■■□□ 2.55
CMTM4-202ENST00000394106 TDRD6O60522 2096 aaKnown RBP30.94■■■□□ 2.54
CMTM4-202ENST00000394106 SPTY2D1-AS1A0A0U1RR47 76 aa30.94■■■□□ 2.54
CMTM4-202ENST00000394106 SPOPO43791 374 aa30.94■■■□□ 2.54
CMTM4-202ENST00000394106 LZTS3O60299 673 aaPredicted RBP30.94■■■□□ 2.54
CMTM4-202ENST00000394106 COMTP21964 271 aa30.94■■■□□ 2.54
CMTM4-202ENST00000394106 PFN3P60673 137 aa30.94■■■□□ 2.54
CMTM4-202ENST00000394106 IRF4Q15306 451 aa30.94■■■□□ 2.54
CMTM4-202ENST00000394106 TPRG1LQ5T0D9 272 aa30.94■■■□□ 2.54
CMTM4-202ENST00000394106 TIGD7Q6NT04 549 aaPredicted RBP30.94■■■□□ 2.54
CMTM4-202ENST00000394106 RHOT1Q8IXI2 618 aa30.94■■■□□ 2.54
CMTM4-202ENST00000394106 TRAF3IP1Q8TDR0 691 aaPredicted RBP30.94■■■□□ 2.54
CMTM4-202ENST00000394106 UCKL1Q9NWZ5 548 aa30.94■■■□□ 2.54
CMTM4-202ENST00000394106 SOWAHDA6NJG2 315 aa30.93■■■□□ 2.54
CMTM4-202ENST00000394106 A8MX80 341 aa30.93■■■□□ 2.54
CMTM4-202ENST00000394106 ENC1O14682 589 aa30.93■■■□□ 2.54
CMTM4-202ENST00000394106 DGKAP23743 735 aa30.93■■■□□ 2.54
CMTM4-202ENST00000394106 SLC10A2Q12908 348 aaPredicted RBP30.93■■■□□ 2.54
CMTM4-202ENST00000394106 LRRC38Q5VT99 294 aa30.93■■■□□ 2.54
CMTM4-202ENST00000394106 PARGQ86W56 976 aa30.93■■■□□ 2.54
CMTM4-202ENST00000394106 TEX26Q8N6G2 289 aa30.93■■■□□ 2.54
CMTM4-202ENST00000394106 IFT43Q96FT9 208 aa30.93■■■□□ 2.54
CMTM4-202ENST00000394106 MAK16Q9BXY0 300 aaKnown RBP30.93■■■□□ 2.54
CMTM4-202ENST00000394106 LUC7LQ9NQ29 371 aaKnown RBP30.93■■■□□ 2.54
CMTM4-202ENST00000394106 C3orf70A6NLC5 250 aaPredicted RBP30.92■■■□□ 2.54
CMTM4-202ENST00000394106 MATN3O15232 486 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 SOCS5O75159 536 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 CPP00450 1065 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 MX2P20592 715 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 CCNCP24863 283 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 THOP1P52888 689 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 TRAF2Q12933 501 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 RALGDSQ12967 914 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 LRRC14Q15048 493 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 SLC25A45Q8N413 288 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP30.92■■■□□ 2.54
CMTM4-202ENST00000394106 CCNYQ8ND76 341 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 RNF25Q96BH1 459 aaPredicted RBP30.92■■■□□ 2.54
CMTM4-202ENST00000394106 ZNF830Q96NB3 372 aaPredicted RBP30.92■■■□□ 2.54
CMTM4-202ENST00000394106 TSGA13Q96PP4 275 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 SEMA3CQ99985 751 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 DDX56Q9NY93 547 aaKnown RBP30.92■■■□□ 2.54
CMTM4-202ENST00000394106 DTLQ9NZJ0 730 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 TTLL3Q9Y4R7 772 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 NEUROG3Q9Y4Z2 214 aa30.92■■■□□ 2.54
CMTM4-202ENST00000394106 FFAR2O15552 330 aa30.91■■■□□ 2.54
CMTM4-202ENST00000394106 HTRA2O43464 458 aaPredicted RBP30.91■■■□□ 2.54
CMTM4-202ENST00000394106 PIAS2O75928 621 aa30.91■■■□□ 2.54
CMTM4-202ENST00000394106 NEBLO76041 1014 aa30.91■■■□□ 2.54
CMTM4-202ENST00000394106 DNAJC3Q13217 504 aa30.91■■■□□ 2.54
CMTM4-202ENST00000394106 WSCD2Q2TBF2 565 aa30.91■■■□□ 2.54
CMTM4-202ENST00000394106 RALGPS1Q5JS13 557 aa30.91■■■□□ 2.54
CMTM4-202ENST00000394106 DPPA4Q7L190 304 aa30.91■■■□□ 2.54
CMTM4-202ENST00000394106 MAML1Q92585 1016 aa30.91■■■□□ 2.54
CMTM4-202ENST00000394106 GOLPH3Q9H4A6 298 aa30.91■■■□□ 2.54
CMTM4-202ENST00000394106 RBM22Q9NW64 420 aaKnown RBP eCLIP30.91■■■□□ 2.54
CMTM4-202ENST00000394106 HEY1Q9Y5J3 304 aa30.91■■■□□ 2.54
CMTM4-202ENST00000394106 ZNF487B1APH4 448 aa30.9■■■□□ 2.54
CMTM4-202ENST00000394106 APOL1O14791 398 aa30.9■■■□□ 2.54
CMTM4-202ENST00000394106 ELFN1P0C7U0 828 aa30.9■■■□□ 2.54
CMTM4-202ENST00000394106 PTK2BQ14289 1009 aa30.9■■■□□ 2.54
CMTM4-202ENST00000394106 RFX6Q8HWS3 928 aa30.9■■■□□ 2.54
CMTM4-202ENST00000394106 TMTC1Q8IUR5 882 aa30.9■■■□□ 2.54
CMTM4-202ENST00000394106 PLD5Q8N7P1 536 aa30.9■■■□□ 2.54
CMTM4-202ENST00000394106 POLR1EQ9GZS1 481 aaKnown RBP30.9■■■□□ 2.54
CMTM4-202ENST00000394106 B4GALT6Q9UBX8 382 aa30.9■■■□□ 2.54
CMTM4-202ENST00000394106 EPN1Q9Y6I3 576 aaPredicted RBP30.9■■■□□ 2.54
CMTM4-202ENST00000394106 A0A1W2PQ67 120 aa30.89■■■□□ 2.54
CMTM4-202ENST00000394106 H3BM21 787 aa30.89■■■□□ 2.54
CMTM4-202ENST00000394106 NDUFA10O95299 355 aa30.89■■■□□ 2.54
CMTM4-202ENST00000394106 CCNB1P14635 433 aa30.89■■■□□ 2.54
CMTM4-202ENST00000394106 HADHBP55084 474 aaKnown RBP30.89■■■□□ 2.54
CMTM4-202ENST00000394106 HNRNPKP61978 463 aaKnown RBP eCLIP30.89■■■□□ 2.54
CMTM4-202ENST00000394106 YPEL5P62699 121 aa30.89■■■□□ 2.54
CMTM4-202ENST00000394106 SLC9A4Q6AI14 798 aa30.89■■■□□ 2.54
CMTM4-202ENST00000394106 LIPIQ6XZB0 460 aa30.89■■■□□ 2.54
CMTM4-202ENST00000394106 VSIG1Q86XK7 387 aa30.89■■■□□ 2.54
CMTM4-202ENST00000394106 CCDC13Q8IYE1 715 aa30.89■■■□□ 2.54
CMTM4-202ENST00000394106 HDAC11Q96DB2 347 aa30.89■■■□□ 2.54
CMTM4-202ENST00000394106 ALG6Q9Y672 507 aa30.89■■■□□ 2.54
CMTM4-202ENST00000394106 TRIM38O00635 465 aa30.88■■■□□ 2.53
CMTM4-202ENST00000394106 CSF2P04141 144 aa30.88■■■□□ 2.53
CMTM4-202ENST00000394106 PCCBP05166 539 aa30.88■■■□□ 2.53
CMTM4-202ENST00000394106 NME1P15531 152 aaKnown RBP30.88■■■□□ 2.53
CMTM4-202ENST00000394106 DSC2Q02487 901 aa30.88■■■□□ 2.53
CMTM4-202ENST00000394106 EIF2B5Q13144 721 aaKnown RBP30.88■■■□□ 2.53
CMTM4-202ENST00000394106 HS1BP3Q53T59 392 aa30.88■■■□□ 2.53
CMTM4-202ENST00000394106 FATE1Q969F0 183 aa30.88■■■□□ 2.53
CMTM4-202ENST00000394106 LGMNQ99538 433 aa30.88■■■□□ 2.53
CMTM4-202ENST00000394106 HAUS2Q9NVX0 235 aa30.88■■■□□ 2.53
CMTM4-202ENST00000394106 KLF15Q9UIH9 416 aa30.88■■■□□ 2.53
CMTM4-202ENST00000394106 MSRB2Q9Y3D2 182 aa30.88■■■□□ 2.53
CMTM4-202ENST00000394106 RAI2Q9Y5P3 530 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms