RNA–Protein interactions for RNA: ENST00000393540.7

CCDC110-202, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC110, Length 2,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-202ENST00000393540 HARS2P49590 506 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 SERPINB8P50452 374 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ZNF140P52738 457 aaPredicted RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 TAS2R39P59534 338 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 RABGAP1LQ5R372 815 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 SPOUT1Q5T280 376 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ACBD5Q5T8D3 534 aaPredicted RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 LGSNQ5TDP6 509 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 RNF219Q5W0B1 726 aaPredicted RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 LINGO4Q6UY18 593 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 NLRP9Q7RTR0 991 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 MTDHQ86UE4 582 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ALYREFQ86V81 257 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 TREML1Q86YW5 311 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 NUDCD3Q8IVD9 361 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 OR13C4Q8NGS5 318 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 RAB3IL1Q8TBN0 382 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ZNF398Q8TD17 642 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 SLC22A17Q8WUG5 538 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 KCTD4Q8WVF5 259 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ANKRD49Q8WVL7 239 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 CDKL2Q92772 493 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 TCEAL4Q96EI5 215 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 CCDC97Q96F63 343 aaPredicted RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 TMEM169Q96HH4 297 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 FEM1CQ96JP0 617 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 EBF4Q9BQW3 602 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 FEM1AQ9BSK4 669 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 TMEM120AQ9BXJ8 343 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 SLC46A2Q9BY10 475 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 RETREG1Q9H6L5 497 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ECT2Q9H8V3 914 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 TNFRSF12AQ9NP84 129 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ARHGEF3Q9NR81 526 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 TLR9Q9NR96 1032 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 MRPL17Q9NRX2 175 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ARL8BQ9NVJ2 186 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 PNPOQ9NVS9 261 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 DCDC2Q9UHG0 476 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 DCTN4Q9UJW0 460 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 IKZF3Q9UKT9 509 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 INTS6Q9UL03 887 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 SLC39A10Q9ULF5 831 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 CCL26Q9Y258 94 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 HCFC2Q9Y5Z7 792 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 CPQQ9Y646 472 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 USH1CQ9Y6N9 552 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 C2orf16Q68DN1 1984 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ZFHX4Q86UP3 3567 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 A0A1B0GVM2 712 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CCDC162PA2VCL2 907 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 TCAF2A6NFQ2 919 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 A8MUI8 341 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 AP3B1O00203 1094 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 PRRG1O14668 218 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 SMAD6O43541 496 aaKnown RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 FZD6O60353 706 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 TBL1XO60907 577 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 GLRA3O75311 464 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CLDN11O75508 207 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CBX6O95503 412 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 EPOP01588 193 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 MPOP05164 745 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 URODP06132 367 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 MYL2P10916 166 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 MBL2P11226 248 aaPredicted RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 MYOGP15173 224 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 FOSL2P15408 326 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 RAG1P15918 1043 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 KCNA5P22460 613 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 TYK2P29597 1187 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 GBP2P32456 591 aaPredicted RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 IRS1P35568 1242 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 PBX2P40425 430 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 PPP3CCP48454 512 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CDKN1CP49918 316 aaPredicted RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CLCN4P51793 760 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 EPHB3P54753 998 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 ELF3P78545 371 aaPredicted RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 SLC7A9P82251 487 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 SMAD3P84022 425 aaKnown RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 PDE1BQ01064 536 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 TFF2Q03403 129 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CDK18Q07002 472 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 ITKQ08881 620 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 TRAF2Q12933 501 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 SEPT6Q14141 434 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CDKN3Q16667 212 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 SLC5A9Q2M3M2 681 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 TAF1BQ53T94 588 aaPredicted RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 FAM91A1Q658Y4 838 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 ZNF470Q6ECI4 717 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 NEPROQ6NW34 567 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 NCEH1Q6PIU2 408 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 HTR3DQ70Z44 454 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CLNKQ7Z7G1 428 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 GALNT7Q86SF2 657 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 SETD3Q86TU7 594 aaPredicted RBP3.79□□□□□ -1.8
CCDC110-202ENST00000393540 CILP2Q8IUL8 1156 aa3.79□□□□□ -1.8
CCDC110-202ENST00000393540 BBS7Q8IWZ6 715 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms