RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 LSM12Q3MHD2 195 aaKnown RBP18.5■□□□□ 0.55
TRAF3-203ENST00000392745 HSP90AA5PQ58FG0 334 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 METTL21CQ5VZV1 264 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 KLC3Q6P597 504 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 ANKS3Q6ZW76 656 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 C14orf80Q86SX3 495 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 ZSCAN18Q8TBC5 510 aaPredicted RBP18.5■□□□□ 0.55
TRAF3-203ENST00000392745 SPPL2BQ8TCT7 592 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 DPF3Q92784 378 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 KLHL32Q96NJ5 620 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 FCRL3Q96P31 734 aaPredicted RBP18.5■□□□□ 0.55
TRAF3-203ENST00000392745 VN1R3Q9BXE9 311 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 CWH43Q9H720 699 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 NDFIP2Q9NV92 336 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 IGSF9Q9P2J2 1179 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 ATP11BQ9Y2G3 1177 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 HS3ST4Q9Y661 456 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 HAPLN1P10915 354 aaPredicted RBP18.5■□□□□ 0.55
TRAF3-203ENST00000392745 ENO3P13929 434 aaPredicted RBP18.5■□□□□ 0.55
TRAF3-203ENST00000392745 ALDH7A1P49419 539 aaKnown RBP18.5■□□□□ 0.55
TRAF3-203ENST00000392745 TAF10Q12962 218 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 ZBTB17Q13105 803 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 MSANTD2Q6P1R3 559 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 TMCO2Q7Z6W1 182 aaPredicted RBP18.5■□□□□ 0.55
TRAF3-203ENST00000392745 TRIM74Q86UV6 250 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 TRIM73Q86UV7 250 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 CEP70Q8NHQ1 597 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 GAB3Q8WWW8 586 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 SLC39A13Q96H72 371 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 SERPINB11Q96P15 392 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 KLHL8Q9P2G9 620 aaPredicted RBP18.5■□□□□ 0.55
TRAF3-203ENST00000392745 RPS6KL1Q9Y6S9 549 aa18.5■□□□□ 0.55
TRAF3-203ENST00000392745 H7C4K7 107 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 ZBTB24O43167 697 aaPredicted RBP18.49■□□□□ 0.55
TRAF3-203ENST00000392745 RPL17P18621 184 aaKnown RBP18.49■□□□□ 0.55
TRAF3-203ENST00000392745 CD68P34810 354 aaPredicted RBP18.49■□□□□ 0.55
TRAF3-203ENST00000392745 EMP3P54852 163 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 IKBKEQ14164 716 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 USP41Q3LFD5 358 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 TMEM198Q66K66 360 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 ZFP1Q6P2D0 407 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 ARHGAP36Q6ZRI8 547 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 FBXO32Q969P5 355 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 CERS2Q96G23 380 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 GATA5Q9BWX5 397 aaPredicted RBP18.49■□□□□ 0.55
TRAF3-203ENST00000392745 TLR6Q9Y2C9 796 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 CEPT1Q9Y6K0 416 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 TCN1P20061 433 aaPredicted RBP18.49■□□□□ 0.55
TRAF3-203ENST00000392745 HOXC13P31276 330 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 GALK1P51570 392 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 EFEMP1Q12805 493 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 NAB1Q13506 487 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 CYLC2Q14093 348 aaPredicted RBP18.49■□□□□ 0.55
TRAF3-203ENST00000392745 ARHGAP12Q8IWW6 846 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 FAM156AQ8NDB6 213 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 CATSPER1Q8NEC5 780 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 FBXO22Q8NEZ5 403 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 MARK4Q96L34 752 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 AGAP3Q96P47 875 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 AGAP2Q99490 1192 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 EIF2B3Q9NR50 452 aaKnown RBP18.49■□□□□ 0.55
TRAF3-203ENST00000392745 GMEB1Q9Y692 573 aa18.49■□□□□ 0.55
TRAF3-203ENST00000392745 PRSS51A0A1B0GVH4 220 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 TRMUO75648 421 aaKnown RBP18.48■□□□□ 0.55
TRAF3-203ENST00000392745 MAGEA12P43365 314 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 MLLT6P55198 1093 aaPredicted RBP18.48■□□□□ 0.55
TRAF3-203ENST00000392745 PIK3R6Q5UE93 754 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 C1orf53Q5VUE5 145 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 FSTL4Q6MZW2 842 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 TMEM126BQ8IUX1 230 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 GIPC2Q8TF65 315 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 CNDP1Q96KN2 507 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 CATSPER2Q96P56 530 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 RBBP8Q99708 897 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 CPNE1Q99829 537 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 BRD8Q9H0E9 1235 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 MPP6Q9NZW5 540 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 CIDEBQ9UHD4 219 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 HEMK1Q9Y5R4 338 aaPredicted RBP18.48■□□□□ 0.55
TRAF3-203ENST00000392745 COL4A6Q14031 1691 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 A0A096LPK6 155 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 ARHGAP10A1A4S6 786 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 TRIM13O60858 407 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 RNASEH2AO75792 299 aaKnown RBP18.48■□□□□ 0.55
TRAF3-203ENST00000392745 CDH2P19022 906 aaPredicted RBP18.48■□□□□ 0.55
TRAF3-203ENST00000392745 NR1H2P55055 460 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 ADARP55265 1226 aaKnown RBP18.48■□□□□ 0.55
TRAF3-203ENST00000392745 CYTH1Q15438 398 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 GRTP1Q5TC63 336 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 STRA8Q7Z7C7 330 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 TMEM102Q8N9M5 508 aaPredicted RBP18.48■□□□□ 0.55
TRAF3-203ENST00000392745 KLHL23Q8NBE8 558 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 RP9Q8TA86 221 aaKnown RBP18.48■□□□□ 0.55
TRAF3-203ENST00000392745 SPATA17Q96L03 361 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 SLC2A11Q9BYW1 496 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 NUF2Q9BZD4 464 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 TIMMDC1Q9NPL8 285 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 TMEM39AQ9NV64 488 aa18.48■□□□□ 0.55
TRAF3-203ENST00000392745 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.48■□□□□ 0.55
TRAF3-203ENST00000392745 DOCK4Q8N1I0 1966 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms