RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 PRKCIP41743 596 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 DUSP3P51452 185 aaPredicted RBP16.71■□□□□ 0.27
PTPRK-208ENST00000392449 YPEL5P62699 121 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 GABREP78334 506 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 PPARDQ03181 441 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 ELP6Q0PNE2 266 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 INPP5AQ14642 412 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 NR0B2Q15466 257 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 ALG11Q2TAA5 492 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 FILIP1LQ4L180 1135 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 CFAP58Q5T655 872 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 RD3Q7Z3Z2 195 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 SRLQ86TD4 932 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 HID1Q8IV36 788 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 PLA2G15Q8NCC3 412 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 BTN2A2Q8WVV5 523 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 FGF11Q92914 225 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 CINPQ9BW66 212 aaPredicted RBP16.71■□□□□ 0.27
PTPRK-208ENST00000392449 BOCQ9BWV1 1114 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 SP110Q9HB58 689 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 USP29Q9HBJ7 922 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 ETNK2Q9NVF9 386 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 SIRPGQ9P1W8 387 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 SALL4Q9UJQ4 1053 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 ATP8A1Q9Y2Q0 1164 aa16.71■□□□□ 0.27
PTPRK-208ENST00000392449 FASNP49327 2511 aaKnown RBP16.71■□□□□ 0.27
PTPRK-208ENST00000392449 KIF26BQ2KJY2 2108 aa16.71■□□□□ 0.26
PTPRK-208ENST00000392449 A0A1W2PQC6 194 aa16.7■□□□□ 0.26
PTPRK-208ENST00000392449 EME2A4GXA9 379 aaPredicted RBP16.7■□□□□ 0.26
PTPRK-208ENST00000392449 LMO7DNF2Z398 122 aa16.7■□□□□ 0.26
PTPRK-208ENST00000392449 RALGDSQ12967 914 aa16.7■□□□□ 0.26
PTPRK-208ENST00000392449 DPYSQ14117 519 aa16.7■□□□□ 0.26
PTPRK-208ENST00000392449 IQCB1Q15051 598 aa16.7■□□□□ 0.26
PTPRK-208ENST00000392449 ENPP7Q6UWV6 458 aa16.7■□□□□ 0.26
PTPRK-208ENST00000392449 LRRC69Q6ZNQ3 347 aa16.7■□□□□ 0.26
PTPRK-208ENST00000392449 FUBP1Q96AE4 644 aaKnown RBP16.7■□□□□ 0.26
PTPRK-208ENST00000392449 BTBD6Q96KE9 485 aa16.7■□□□□ 0.26
PTPRK-208ENST00000392449 ZNF641Q96N77 438 aaPredicted RBP16.7■□□□□ 0.26
PTPRK-208ENST00000392449 FUCA2Q9BTY2 467 aa16.7■□□□□ 0.26
PTPRK-208ENST00000392449 SHROOM3Q8TF72 1996 aa16.7■□□□□ 0.26
PTPRK-208ENST00000392449 TPP1O14773 563 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 RRP8O43159 456 aaKnown RBP16.69■□□□□ 0.26
PTPRK-208ENST00000392449 LZTS3O60299 673 aaPredicted RBP16.69■□□□□ 0.26
PTPRK-208ENST00000392449 ANXA6P08133 673 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 GZMAP12544 262 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 ACTN2P35609 894 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 ISXQ2M1V0 245 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 C3orf38Q5JPI3 329 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 C6orf132Q5T0Z8 1188 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 TXNRD3NBQ6F5E7 133 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 PPP1R2P3Q6NXS1 205 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 ERAP2Q6P179 960 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 BRAT1Q6PJG6 821 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 KYQ8NBH2 561 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 PCDH19Q8TAB3 1148 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 FNIP1Q8TF40 1166 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 HSPH1Q92598 858 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 PDXPQ96GD0 296 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 ATXN7L3BQ96GX2 97 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 TUBGCP5Q96RT8 1024 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 APOOQ9BUR5 198 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 ATP13A3Q9H7F0 1226 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 SYNDIG1Q9H7V2 258 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 ZWILCHQ9H900 591 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 SATB2Q9UPW6 733 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 MGAQ8IWI9 3026 aa16.69■□□□□ 0.26
PTPRK-208ENST00000392449 SERPINC1P01008 464 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 GM2AP17900 193 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 AMPD1P23109 780 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 SERPINA4P29622 427 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 SCNN1BP51168 640 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 SUOXP51687 545 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 HK3P52790 923 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 IL10RBQ08334 325 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 SLC10A7Q0GE19 358 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 GRM3Q14832 879 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 NFATC4Q14934 902 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 NR1I3Q14994 352 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 SPACA3Q8IXA5 215 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 PELI3Q8N2H9 469 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 HCAR2Q8TDS4 363 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 ECHDC3Q96DC8 303 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 PRORYQ9H606 182 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 EVA1BQ9NVM1 165 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 GULP1Q9UBP9 304 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 RABGEF1Q9UJ41 708 aa16.68■□□□□ 0.26
PTPRK-208ENST00000392449 EIF3CLB5ME19 914 aaKnown RBP16.67■□□□□ 0.26
PTPRK-208ENST00000392449 RECQL5O94762 991 aaPredicted RBP16.67■□□□□ 0.26
PTPRK-208ENST00000392449 PRB1P04280 392 aa16.67■□□□□ 0.26
PTPRK-208ENST00000392449 CSNK1DP48730 415 aa16.67■□□□□ 0.26
PTPRK-208ENST00000392449 PDX1P52945 283 aa16.67■□□□□ 0.26
PTPRK-208ENST00000392449 TLE3Q04726 772 aa16.67■□□□□ 0.26
PTPRK-208ENST00000392449 BCL2L1Q07817 233 aa16.67■□□□□ 0.26
PTPRK-208ENST00000392449 HGSNATQ68CP4 663 aa16.67■□□□□ 0.26
PTPRK-208ENST00000392449 LUZP1Q86V48 1076 aa16.67■□□□□ 0.26
PTPRK-208ENST00000392449 SFTPA2Q8IWL1 248 aa16.67■□□□□ 0.26
PTPRK-208ENST00000392449 PGBD5Q8N414 524 aa16.67■□□□□ 0.26
PTPRK-208ENST00000392449 PAF1Q8N7H5 531 aa16.67■□□□□ 0.26
PTPRK-208ENST00000392449 FCRL3Q96P31 734 aaPredicted RBP16.67■□□□□ 0.26
PTPRK-208ENST00000392449 EIF3CQ99613 913 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms