RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 UPK3BL1B0FP48 263 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 UPK3BL2E5RIL1 263 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 RNF103O00237 685 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 PGRMC1O00264 195 aaKnown RBP6.81□□□□□ -1.32
UBBP1-201ENST00000392399 NEMP1O14524 444 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 KCNN4O15554 427 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 LIASO43766 372 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 FZD6O60353 706 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 GCATO75600 419 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 ANXA9O76027 345 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 FSBPO95073 299 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 PCDH8O95206 1070 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 PGLSO95336 258 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 PIGNO95427 931 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 ATP1A1P05023 1023 aaKnown RBP6.81□□□□□ -1.32
UBBP1-201ENST00000392399 ITGAVP06756 1048 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 ZNF806P0C7X5 589 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 CXCR5P32302 372 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 ACTN2P35609 894 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 CD86P42081 329 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 PTGER3P43115 390 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 TNNT3P45378 269 aaPredicted RBP6.81□□□□□ -1.32
UBBP1-201ENST00000392399 METAP1P53582 386 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 ETF1P62495 437 aaKnown RBP6.81□□□□□ -1.32
UBBP1-201ENST00000392399 SKOR1P84550 965 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 DSC2Q02487 901 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 CREB5Q02930 508 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 LMNB2Q03252 620 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 NIPAL4Q0D2K0 466 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 CAMK2BQ13554 666 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 PRPSAP1Q14558 356 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 OASLQ15646 514 aaKnown RBP6.81□□□□□ -1.32
UBBP1-201ENST00000392399 DUOXA1Q1HG43 343 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 PARP6Q2NL67 630 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 POM121L1PQ3SYA9 428 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 TMEM52BQ4KMG9 183 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 SETMARQ53H47 684 aaPredicted RBP6.81□□□□□ -1.32
UBBP1-201ENST00000392399 PLA2G2CQ5R387 149 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 PEAR1Q5VY43 1037 aaPredicted RBP6.81□□□□□ -1.32
UBBP1-201ENST00000392399 CCDC70Q6NSX1 233 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 USP45Q70EL2 814 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 CYP2U1Q7Z449 544 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 HORMAD1Q86X24 394 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 RAVER1Q8IY67 606 aaKnown RBP6.81□□□□□ -1.32
UBBP1-201ENST00000392399 RGL4Q8IZJ4 473 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 ZNF567Q8N184 647 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 ACTRT1Q8TDG2 376 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 LRRN4Q8WUT4 740 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 SKA1Q96BD8 255 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 TADA1Q96BN2 335 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 BIRC7Q96CA5 298 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 RTP4Q96DX8 246 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 FAM122AQ96E09 287 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 HSPA12BQ96MM6 686 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 SPATA13Q96N96 652 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 LENG8Q96PV6 779 aaPredicted RBP6.81□□□□□ -1.32
UBBP1-201ENST00000392399 OSBPL9Q96SU4 736 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 NAPGQ99747 312 aaPredicted RBP6.81□□□□□ -1.32
UBBP1-201ENST00000392399 TDRD1Q9BXT4 1180 aaKnown RBP6.81□□□□□ -1.32
UBBP1-201ENST00000392399 C6orf106Q9H6K1 298 aaPredicted RBP6.81□□□□□ -1.32
UBBP1-201ENST00000392399 PCDH9Q9HC56 1237 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 RRAGDQ9NQL2 400 aaPredicted RBP6.81□□□□□ -1.32
UBBP1-201ENST00000392399 KLHL8Q9P2G9 620 aaPredicted RBP6.81□□□□□ -1.32
UBBP1-201ENST00000392399 NCDNQ9UBB6 729 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 FAM153AQ9UHL3 310 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 RAPGEFL1Q9UHV5 662 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 PILRBQ9UKJ0 227 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 ZNF148Q9UQR1 794 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 AAR2Q9Y312 384 aaKnown RBP6.81□□□□□ -1.32
UBBP1-201ENST00000392399 RAI2Q9Y5P3 530 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 SAR1BQ9Y6B6 198 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 FAM186AA6NE01 2351 aa6.81□□□□□ -1.32
UBBP1-201ENST00000392399 EML5Q05BV3 1969 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 LAMA1P25391 3075 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 A0A0J9YYE9 177 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 A0A1B0GTW7 788 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 A0A1W2PQU0 124 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 TTC24A2A3L6 582 aaPredicted RBP6.8□□□□□ -1.32
UBBP1-201ENST00000392399 GOLGA6CA6NDK9 693 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 GOLGA6BA6NDN3 693 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 ANKRD66B4E2M5 251 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 PRAMEF26H0Y7S4 382 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 PSMD11O00231 422 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 PLK4O00444 970 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 TOR1BO14657 336 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 PSMD3O43242 534 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 MAGEC1O60732 1142 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 TM7SF2O76062 418 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 CPP00450 1065 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 TRBC1P01850 177 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 IGHV4-34P06331 123 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 MMP2P08253 660 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 GOLGA6DP0CG33 693 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 CYP2A6P11509 494 aaPredicted RBP6.8□□□□□ -1.32
UBBP1-201ENST00000392399 ZNF30P17039 623 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 NFKB1P19838 968 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 HNRNPA2B1P22626 353 aaKnown RBP6.8□□□□□ -1.32
UBBP1-201ENST00000392399 ITPKAP23677 461 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 CD68P34810 354 aaPredicted RBP6.8□□□□□ -1.32
UBBP1-201ENST00000392399 MPLP40238 635 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms