RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 CDH4P55283 916 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 POLE2P56282 527 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 LRRC73Q5JTD7 316 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 CNKSR3Q6P9H4 555 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 ELMO1Q92556 727 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 MYO19Q96H55 970 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 SERAC1Q96JX3 654 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 PARVBQ9HBI1 364 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 A0A087X1B8 175 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 FFAR3O14843 346 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 GPR42O15529 346 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 HOXB8P17481 243 aaPredicted RBP16.6■□□□□ 0.25
SNX9-201ENST00000392185 CBX2Q14781 532 aaPredicted RBP16.6■□□□□ 0.25
SNX9-201ENST00000392185 VPS37AQ8NEZ2 397 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 OR56A4Q8NGH8 313 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 NXNL1Q96CM4 212 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 MTFMTQ96DP5 389 aaKnown RBP16.6■□□□□ 0.25
SNX9-201ENST00000392185 MRGBPQ9NV56 204 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 APPL1Q9UKG1 709 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 SOX13Q9UN79 622 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 PLLPQ9Y342 182 aa16.6■□□□□ 0.25
SNX9-201ENST00000392185 PEX11AO75192 247 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 KRT6AP02538 564 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 KRT6BP04259 564 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 KRT6CP48668 564 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 RAP1GDS1P52306 607 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 SEMA5AQ13591 1074 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 ZNF460Q14592 562 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 ATP6AP1LQ52LC2 224 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 TBC1D19Q8N5T2 526 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 ZFYVE1Q9HBF4 777 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 DEC1Q9P2X7 70 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 OPTCQ9UBM4 332 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 KLQ9UEF7 1012 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 ZBTB14O43829 449 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 ITGBL1O95965 494 aaPredicted RBP16.59■□□□□ 0.25
SNX9-201ENST00000392185 HLA-DQB2P05538 268 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 SKIV2L2P42285 1042 aaKnown RBP16.59■□□□□ 0.25
SNX9-201ENST00000392185 GABRB2P47870 512 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 CXCR3P49682 368 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 TBL3Q12788 808 aaKnown RBP16.59■□□□□ 0.25
SNX9-201ENST00000392185 FASTKQ14296 549 aaKnown RBP16.59■□□□□ 0.25
SNX9-201ENST00000392185 ST13P4Q8IZP2 240 aaPredicted RBP16.59■□□□□ 0.25
SNX9-201ENST00000392185 ZNF557Q8N988 423 aaPredicted RBP16.59■□□□□ 0.25
SNX9-201ENST00000392185 CNDP1Q96KN2 507 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 COPS8Q99627 209 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 FAM126AQ9BYI3 521 aaPredicted RBP16.59■□□□□ 0.25
SNX9-201ENST00000392185 ZNHIT2Q9UHR6 403 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 ABHD14A-ACY1A0A1B0GW23 586 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 DNM1LO00429 736 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 IFRD1O00458 451 aaPredicted RBP16.59■□□□□ 0.25
SNX9-201ENST00000392185 SNAP91O60641 907 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 PGS1Q32NB8 556 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 FSTL4Q6MZW2 842 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 NKAPQ8N5F7 415 aaKnown RBP16.59■□□□□ 0.25
SNX9-201ENST00000392185 DCBLD1Q8N8Z6 715 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 ZNF461Q8TAF7 563 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 TCAF1Q9Y4C2 921 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 DDX60LQ5H9U9 1706 aaKnown RBP16.59■□□□□ 0.25
SNX9-201ENST00000392185 OR51F1A6NGY5 319 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 BPGMP07738 259 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 RAET1GQ6H3X3 334 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 C14orf80Q86SX3 495 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 CDYL2Q8N8U2 506 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 KYQ8NBH2 561 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 YIPF2Q9BWQ6 316 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 CXCL16Q9H2A7 254 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 KCNK4Q9NYG8 393 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 IGSF9Q9P2J2 1179 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 CNTN6Q9UQ52 1028 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 BTRCQ9Y297 605 aa16.59■□□□□ 0.25
SNX9-201ENST00000392185 F5P12259 2224 aa16.58■□□□□ 0.25
SNX9-201ENST00000392185 PER2O15055 1255 aa16.58■□□□□ 0.25
SNX9-201ENST00000392185 FAM163BP0C2L3 166 aa16.58■□□□□ 0.25
SNX9-201ENST00000392185 CYP2A7P20853 494 aa16.58■□□□□ 0.25
SNX9-201ENST00000392185 PHEXP78562 749 aa16.58■□□□□ 0.25
SNX9-201ENST00000392185 PPIDQ08752 370 aaKnown RBP16.58■□□□□ 0.25
SNX9-201ENST00000392185 ZNF252P-AS1Q0IIN9 211 aa16.58■□□□□ 0.25
SNX9-201ENST00000392185 IL27RAQ6UWB1 636 aa16.58■□□□□ 0.25
SNX9-201ENST00000392185 SLCO2A1Q92959 643 aa16.58■□□□□ 0.25
SNX9-201ENST00000392185 TLCD1Q96CP7 247 aa16.58■□□□□ 0.25
SNX9-201ENST00000392185 PRPF18Q99633 342 aaKnown RBP16.58■□□□□ 0.25
SNX9-201ENST00000392185 DYRK1BQ9Y463 629 aa16.58■□□□□ 0.25
SNX9-201ENST00000392185 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.58■□□□□ 0.24
SNX9-201ENST00000392185 CXorf49A8MYA2 514 aaPredicted RBP16.58■□□□□ 0.24
SNX9-201ENST00000392185 MYO1GB0I1T2 1018 aa16.58■□□□□ 0.24
SNX9-201ENST00000392185 MGEA5O60502 916 aa16.58■□□□□ 0.24
SNX9-201ENST00000392185 SEC22BO75396 215 aa16.58■□□□□ 0.24
SNX9-201ENST00000392185 DGKAP23743 735 aa16.58■□□□□ 0.24
SNX9-201ENST00000392185 NDST2P52849 883 aa16.58■□□□□ 0.24
SNX9-201ENST00000392185 PKNOX1P55347 436 aa16.58■□□□□ 0.24
SNX9-201ENST00000392185 IL10RBQ08334 325 aa16.58■□□□□ 0.24
SNX9-201ENST00000392185 PPP1R15BQ5SWA1 713 aa16.58■□□□□ 0.24
SNX9-201ENST00000392185 TMPRSS6Q8IU80 811 aa16.58■□□□□ 0.24
SNX9-201ENST00000392185 FAM162AQ96A26 154 aa16.58■□□□□ 0.24
SNX9-201ENST00000392185 LINGO1Q96FE5 620 aa16.58■□□□□ 0.24
SNX9-201ENST00000392185 ZCCHC2Q9C0B9 1178 aaKnown RBP16.58■□□□□ 0.24
SNX9-201ENST00000392185 NMUR1Q9HB89 426 aa16.58■□□□□ 0.24
SNX9-201ENST00000392185 ZNF358Q9NW07 568 aa16.58■□□□□ 0.24
SNX9-201ENST00000392185 GJD2Q9UKL4 321 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms