RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 SLC25A17O43808 307 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 CBX6O95503 412 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 FAM90A15PP0C7V4 464 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 FAM90A14PP0C7W9 464 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 HNRNPH1P31943 449 aaKnown RBP1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 STX2P32856 288 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 TTKP33981 857 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 TMPOP42166 694 aaKnown RBP1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 PCP4P48539 62 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 ALDH18A1P54886 795 aaKnown RBP1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 ITGA9Q13797 1035 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 RAB30Q15771 203 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 ARL13BQ3SXY8 428 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 WDR38Q5JTN6 314 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 ZNF790Q6PG37 636 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 WDR63Q8IWG1 891 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 BRSK2Q8IWQ3 736 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 NRSN1Q8IZ57 195 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 SLC34A3Q8N130 599 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 GALNT15Q8N3T1 639 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 DUSP19Q8WTR2 217 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 FCAMRQ8WWV6 532 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 THAP4Q8WY91 577 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 RND1Q92730 232 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 ERGIC1Q969X5 290 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 ARRDC3Q96B67 414 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 ABHD8Q96I13 439 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 SYT11Q9BT88 431 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 MCRIP2Q9BUT9 160 aaKnown RBP1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 NECTIN3Q9NQS3 549 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 ANKRD10Q9NXR5 420 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 BARHL2Q9NY43 387 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 DHDHQ9UQ10 334 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 MRPS28Q9Y2Q9 187 aaKnown RBP1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 C2CD2Q9Y426 696 aa1.31□□□□□ -2.2
RNU6-239P-201ENST00000390990 TRIOBPQ9H2D6 2365 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 IGKV6D-21A0A0A0MT36 114 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 ANO9A1A5B4 782 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 KRTAP4-16G5E9R7 235 aaPredicted RBP1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 RASA4O43374 803 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 PI15O43692 258 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 TFPIP10646 304 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 CYP4B1P13584 511 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 NPPBP16860 134 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 PTPN9P43378 593 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 CENPAP49450 140 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 HOXA1P49639 335 aaPredicted RBP1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 TNFAIP2Q03169 654 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 PEX6Q13608 980 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 PMS2P11Q13670 270 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 SAFBQ15424 915 aaKnown RBP eCLIP1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 RPE65Q16518 533 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 ME3Q16798 604 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 BTBD16Q32M84 506 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 SIRPB2Q5JXA9 342 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 ARL6IP4Q66PJ3 421 aaKnown RBP1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 FBXO38Q6PIJ6 1188 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 B3GNT6Q6ZMB0 384 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 ADGRA1Q86SQ6 560 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 TRPT1Q86TN4 253 aaKnown RBP1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 ZNF584Q8IVC4 421 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 CHERPQ8IWX8 916 aaKnown RBP1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 RAVER1Q8IY67 606 aaKnown RBP1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 DSELQ8IZU8 1212 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 C1orf87Q8N0U7 546 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 MAGEB6Q8N7X4 407 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 LSM14AQ8ND56 463 aaKnown RBP1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 STAG1Q8WVM7 1258 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 RNF183Q96D59 192 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 POLR3CQ9BUI4 534 aaPredicted RBP1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 PRDM8Q9NQV8 689 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 CYSLTR2Q9NS75 346 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 ATP8A2Q9NTI2 1148 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 LIN7CQ9NUP9 197 aaKnown RBP1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 TMEM181Q9P2C4 612 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 CHPF2Q9P2E5 772 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 CLIP2Q9UDT6 1046 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 FBXO40Q9UH90 709 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 ASIC3Q9UHC3 531 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 PADI1Q9ULC6 663 aa1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 ZNF646O15015 1829 aaPredicted RBP1.3□□□□□ -2.2
RNU6-239P-201ENST00000390990 TAF1P21675 1872 aa1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 OR6C68A6NDL8 312 aa1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 KLLNB2CW77 178 aa1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 PIP5K1BO14986 540 aa1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 STRNO43815 780 aa1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 CIDEAO60543 219 aa1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 CCNT1O60563 726 aaKnown RBP1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 PQBP1O60828 265 aaKnown RBP1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 TCEA3O75764 348 aa1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 RGS11O94810 467 aa1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 IL1AP01583 271 aa1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 TFRCP02786 760 aaKnown RBP1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 CYP21A2P08686 494 aa1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 S1PR1P21453 382 aa1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 HOXC8P31273 242 aa1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 MAP2K2P36507 400 aa1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 USP8P40818 1118 aa1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 MTNR1AP48039 350 aa1.29□□□□□ -2.2
RNU6-239P-201ENST00000390990 PRIM2P49643 509 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms