RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 GPR88Q9GZN0 384 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 HOXD1Q9GZZ0 328 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 SHARPINQ9H0F6 387 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 CSTL1Q9H114 145 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 VCXQ9H320 206 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 TP63Q9H3D4 680 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 KCTD10Q9H3F6 313 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 RAD21L1Q9H4I0 556 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 IKZF5Q9H5V7 419 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 BICC1Q9H694 974 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 GREM2Q9H772 168 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ZMAT4Q9H898 229 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 BRD9Q9H8M2 597 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 HEXA-AS1Q9H8Q6 139 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 GPR35Q9HC97 309 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 LHX9Q9NQ69 397 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF331Q9NQX6 463 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 SERINC1Q9NRX5 453 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 TOMM22Q9NS69 142 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ASNSD1Q9NWL6 643 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 TEX10Q9NXF1 929 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ERAP1Q9NZ08 941 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 FLRT3Q9NZU0 649 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 HCN3Q9P1Z3 774 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 CFAP97Q9P2B7 532 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 B3GAT1Q9P2W7 334 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 MBD2Q9UBB5 411 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 HESX1Q9UBX0 185 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF69Q9UC07 566 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 FBXL17Q9UF56 701 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 POLLQ9UGP5 575 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 SLCO3A1Q9UIG8 710 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 MSRAQ9UJ68 235 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 TRPC5Q9UL62 973 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 RAB23Q9ULC3 237 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ZBTB21Q9ULJ3 1066 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 NDRG4Q9ULP0 352 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 KCNJ14Q9UNX9 436 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 SHOC2Q9UQ13 582 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 DRG1Q9Y295 367 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF510Q9Y2H8 683 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 KLHL20Q9Y2M5 609 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 LAS1LQ9Y4W2 734 aaKnown RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 PCDHA9Q9Y5H5 950 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 SPO11Q9Y5K1 396 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 HEMK1Q9Y5R4 338 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 SNX14Q9Y5W7 946 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 NF1P21359 2839 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 LPAP08519 4548 aa-0.31□□□□□ -2.46
TRAJ28-201ENST00000390509 PDZD2O15018 2839 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 SPATA31A5Q5VU36 1347 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 SPATA31A7Q8IWB4 1347 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MYBBP1AQ9BQG0 1328 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 CACNA1EQ15878 2313 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 GIMAP1-GIMAP5A0A087WTJ2 511 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 KLF18A0A0U1RQI7 1052 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 C11orf97A0A1B0GVM6 126 aaPredicted RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 A0A1W2PPK0 400 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 hDV102S1A0JD36 115 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 TARSL2A2RTX5 802 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 CPED1A4D0V7 1026 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 GSAPA4D1B5 854 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MFSD2BA6NFX1 497 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 TMEM88BA6NKF7 163 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 GOLGA8AA7E2F4 631 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 A8MU76 341 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 A8MXK9 166 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 C16orf90A8MZG2 172 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 M0QYG6 137 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 WWP2O00308 870 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 EXOC5O00471 708 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 DLGAP1O14490 977 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PRYO14603 147 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 TNFSF11O14788 317 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 TIMM23O14925 209 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 DCLK1O15075 740 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MSI1O43347 362 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 WDR1O75083 606 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 SH3BGRLO75368 114 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MED6O75586 246 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 TRMUO75648 421 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 NEURL1O76050 574 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 SEC14L2O76054 403 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 AP2A2O94973 939 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 STBD1O95210 358 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 LYPD3O95274 346 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MAP4K4O95819 1239 aaPredicted RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 RECKO95980 971 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 RAF1P04049 648 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ENO1P06733 434 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 GJB1P08034 283 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 P0C880 135 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ZSCAN5DPP0CG00 497 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 THEGLP0DJG4 465 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 TMIGD3P0DMS9 266 aaPredicted RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 IGHV4-38-2P0DP08 117 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PDIA4P13667 645 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 HLA-DOBP13765 273 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ANPEPP15144 967 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 CD1EP15812 388 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms