RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ZNF182P17025 639 aaPredicted RBP14.33□□□□□ -0.12
RTF1-201ENST00000389629 ARF4P18085 180 aaPredicted RBP14.33□□□□□ -0.12
RTF1-201ENST00000389629 EN1Q05925 392 aaPredicted RBP14.33□□□□□ -0.12
RTF1-201ENST00000389629 MERTKQ12866 999 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 BNIP2Q12982 314 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 PCLAFQ15004 111 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 RALGPS2Q86X27 583 aaPredicted RBP14.33□□□□□ -0.12
RTF1-201ENST00000389629 MARVELD2Q8N4S9 558 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 WDTC1Q8N5D0 677 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.33□□□□□ -0.12
RTF1-201ENST00000389629 PSAT1Q9Y617 370 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 CLDN5O00501 218 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 ZBTB24O43167 697 aaPredicted RBP14.33□□□□□ -0.12
RTF1-201ENST00000389629 CST1P01037 141 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 CPB1P15086 417 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 MRPS5P82675 430 aaKnown RBP14.33□□□□□ -0.12
RTF1-201ENST00000389629 SEMA5AQ13591 1074 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 CCDC142Q17RM4 750 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 MCFD2Q8NI22 146 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 HM13Q8TCT9 377 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 CLEC4CQ8WTT0 213 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 OTULINQ96BN8 352 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 HSFY1Q96LI6 401 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 NUAK2Q9H093 628 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 EHD3Q9NZN3 535 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 PCDHGB4Q9UN71 923 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 FAM50BQ9Y247 325 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 ALS2Q96Q42 1657 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 CCNKO75909 580 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 RECQL4O94761 1208 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 GLP2RO95838 553 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 FGFR1P11362 822 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 IL12AP29459 219 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 CCR10P46092 362 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 MAPRE1Q15691 268 aaKnown RBP14.33□□□□□ -0.12
RTF1-201ENST00000389629 CATSPERGQ6ZRH7 1159 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 UNC93AQ86WB7 457 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 METTL6Q8TCB7 284 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 NIFKQ9BYG3 293 aaKnown RBP14.33□□□□□ -0.12
RTF1-201ENST00000389629 FBXO5Q9UKT4 447 aa14.33□□□□□ -0.12
RTF1-201ENST00000389629 NEMP2A6NFY4 417 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 FBP2O00757 339 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 TFECO14948 347 aaPredicted RBP14.32□□□□□ -0.12
RTF1-201ENST00000389629 FGF3P11487 239 aaPredicted RBP14.32□□□□□ -0.12
RTF1-201ENST00000389629 DDR2Q16832 855 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 TFAP2DQ7Z6R9 452 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 ADGRG6Q86SQ4 1221 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 FSTL5Q8N475 847 aaPredicted RBP14.32□□□□□ -0.12
RTF1-201ENST00000389629 CENPNQ96H22 339 aaPredicted RBP14.32□□□□□ -0.12
RTF1-201ENST00000389629 OAZ3Q9UMX2 235 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 SYNDIG1LA6NDD5 238 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 ETV4P43268 484 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 CACHD1Q5VU97 1274 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 SLC27A1Q6PCB7 646 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 ZYG11AQ6WRX3 759 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 MILR1Q7Z6M3 343 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 SETD9Q8NE22 299 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 HIPK3Q9H422 1215 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 OCEL1Q9H607 264 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 CDH9Q9ULB4 789 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 CDC42EP1Q00587 391 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 PPIL2Q13356 520 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 ZNF829Q3KNS6 432 aaPredicted RBP14.32□□□□□ -0.12
RTF1-201ENST00000389629 FBXO48Q5FWF7 155 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 PTRHD1Q6GMV3 140 aaKnown RBP14.32□□□□□ -0.12
RTF1-201ENST00000389629 TIGD7Q6NT04 549 aaPredicted RBP14.32□□□□□ -0.12
RTF1-201ENST00000389629 C15orf39Q6ZRI6 1047 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 ILDR2Q71H61 639 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 C11orf74Q86VG3 221 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 NT5DC4Q86YG4 428 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 ISOC1Q96CN7 298 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 LPIN3Q9BQK8 851 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 TAF1P21675 1872 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 CDK4P11802 303 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 MPP1Q00013 466 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 OLIG2Q13516 323 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 MGAT5BQ3V5L5 792 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 CELF3Q5SZQ8 465 aaKnown RBP14.32□□□□□ -0.12
RTF1-201ENST00000389629 PROX1Q92786 737 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 TRIM63Q969Q1 353 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 EMID1Q96A84 441 aaPredicted RBP14.32□□□□□ -0.12
RTF1-201ENST00000389629 PRICKLE1Q96MT3 831 aaPredicted RBP14.32□□□□□ -0.12
RTF1-201ENST00000389629 CITED4Q96RK1 184 aa14.32□□□□□ -0.12
RTF1-201ENST00000389629 COPG1Q9Y678 874 aaKnown RBP14.32□□□□□ -0.12
RTF1-201ENST00000389629 NAV1Q8NEY1 1877 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 CENPXA8MT69 81 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 PSMD11O00231 422 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 MSCO60682 206 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 CYP4F2P78329 520 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 CYP4F3Q08477 520 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 SCAIQ8N9R8 606 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 APOL4Q9BPW4 351 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 PRKD2Q9BZL6 878 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 ZMYM5Q9UJ78 669 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 C3orf18Q9UK00 162 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 SLC30A1Q9Y6M5 507 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 TYW5A2RUC4 315 aaKnown RBP14.31□□□□□ -0.12
RTF1-201ENST00000389629 RNASEH2AO75792 299 aaKnown RBP14.31□□□□□ -0.12
RTF1-201ENST00000389629 PIGRP01833 764 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 SLC7A1P30825 629 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms