RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ADAM10O14672 748 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 SCAMP1O15126 338 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 TLX3O43711 291 aaPredicted RBP5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 NKX2-2O95096 273 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 CLDN7O95471 211 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 KLKB1P03952 638 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 RB1P06400 928 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 CYP19A1P11511 503 aaPredicted RBP5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 ETFAP13804 333 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 IL7RP16871 459 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 ITGAXP20702 1163 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 SAT1P21673 171 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 KELP23276 732 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 MMP13P45452 471 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 ALDH7A1P49419 539 aaKnown RBP5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 TFAP4Q01664 338 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 GRIK3Q13003 919 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 LPIN1Q14693 890 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 EZH2Q15910 746 aaKnown RBP5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 SRSF7Q16629 238 aaKnown RBP eCLIP5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 ALG11Q2TAA5 492 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 ESCO2Q56NI9 601 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 C6orf141Q5SZD1 244 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 PRIMA1Q86XR5 153 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 TMEM174Q8WUU8 243 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 TMEM18Q96B42 140 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 PGAM5Q96HS1 289 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 HARBI1Q96MB7 349 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 ZNF570Q96NI8 536 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 ZMYM2Q9UBW7 1377 aa5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 CHORDC1Q9UHD1 332 aaPredicted RBP5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 LSM4Q9Y4Z0 139 aaKnown RBP5.61□□□□□ -1.51
RNU6-40P-201ENST00000384254 TTBK1Q5TCY1 1321 aaPredicted RBP5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 A0A1W2PQF6 199 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 WIPF3A6NGB9 483 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 MDM4O15151 490 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 CNOT3O75175 753 aaKnown RBP5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 RBMXL2O75526 392 aaKnown RBP5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 PRR35P0CG20 571 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 AKR1B1P15121 316 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 CD58P19256 250 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 GARSP41250 739 aaKnown RBP5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 MRPL12P52815 198 aaKnown RBP5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 HMGA2P52926 109 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 SORDQ00796 357 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 SRSF4Q08170 494 aaKnown RBP5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 FAM27E3Q08E93 113 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 STK4Q13043 487 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 MTX1Q13505 466 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 SHBQ15464 509 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 TRIP6Q15654 476 aaKnown RBP5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 NAB2Q15742 525 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 TMEM71Q6P5X7 295 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 SLC2A7Q6PXP3 512 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 GLDNQ6ZMI3 551 aaPredicted RBP5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 GALNT5Q7Z7M9 940 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 RBFAQ8N0V3 343 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 KDM1BQ8NB78 822 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 BEST2Q8NFU1 509 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 LPAR1Q92633 364 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 MOAP1Q96BY2 351 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 SAT2Q96F10 170 aaPredicted RBP5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 TMEM47Q9BQJ4 181 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 MXD3Q9BW11 206 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 KLHL31Q9H511 634 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 RANGRFQ9HD47 186 aaPredicted RBP5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 FZD3Q9NPG1 666 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 ABI3Q9P2A4 366 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 COG5Q9UP83 839 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 ERVK-11Q9UQG0 969 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 MAU2Q9Y6X3 613 aa5.6□□□□□ -1.51
RNU6-40P-201ENST00000384254 A0A0U1RQF3 1178 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 A0A1W2PQ09 198 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 A8MZ25 164 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 AKR1B15C9JRZ8 316 aaPredicted RBP5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 CHL1O00533 1208 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 AKAP8O43823 692 aaKnown RBP5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 RGS11O94810 467 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 CHRNB2P17787 502 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 MYF6P23409 242 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 CHATP28329 748 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 HOXD9P28356 352 aaPredicted RBP5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 CD38P28907 300 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 NNMTP40261 264 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 EIF2DP41214 584 aaKnown RBP5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 PPP3CCP48454 512 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 GALCP54803 685 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 LRMPQ12912 555 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 EPHA10Q5JZY3 1008 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 PATL1Q86TB9 770 aaKnown RBP5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 SFTPA2Q8IWL1 248 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 SCCPDHQ8NBX0 429 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 HUS1BQ8NHY5 278 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 MPLKIPQ8TAP9 179 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 PIGOQ8TEQ8 1089 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 ZKSCAN4Q969J2 545 aaPredicted RBP5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 SLITRK1Q96PX8 696 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 CENPOQ9BU64 300 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 NPFFR1Q9GZQ6 430 aa5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 MAP6D1Q9H9H5 199 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms