RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 INSCQ1MX18 579 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 RALGPS1Q5JS13 557 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 BRMS1LQ5PSV4 323 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 RNF220Q5VTB9 566 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 DCLRE1AQ6PJP8 1040 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 GPRIN3Q6ZVF9 776 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 TMEM132CQ8N3T6 1108 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 ZNF781Q8N8C0 355 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 RDH11Q8TC12 318 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 BTN2A2Q8WVV5 523 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 RSPH1Q8WYR4 309 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 PCED1BQ96HM7 432 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 EBF4Q9BQW3 602 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 CORO1CQ9ULV4 474 aaPredicted RBP17.24■□□□□ 0.35
SGCB-201ENST00000381431 PRPF19Q9UMS4 504 aaKnown RBP17.24■□□□□ 0.35
SGCB-201ENST00000381431 WASF2Q9Y6W5 498 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 TGDSO95455 350 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 PIK3CGP48736 1102 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 GPR15P49685 360 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 LIMK2P53671 638 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 GPR158Q5T848 1215 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 AAGABQ6PD74 315 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 CNSTQ6PJW8 725 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 TDRKHQ9Y2W6 561 aaKnown RBP17.23■□□□□ 0.35
SGCB-201ENST00000381431 TIMM22Q9Y584 194 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 PMM2O15305 246 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 TIPRLO75663 272 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 RFWD3Q6PCD5 774 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 ARHGAP36Q6ZRI8 547 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 DENND6AQ8IWF6 608 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 BPIFB6Q8NFQ5 453 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 HBEGFQ99075 208 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 ZDHHC6Q9H6R6 413 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 ZNF395Q9H8N7 513 aaPredicted RBP17.23■□□□□ 0.35
SGCB-201ENST00000381431 MCM8Q9UJA3 840 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 ZNF180Q9UJW8 692 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 SDK1Q7Z5N4 2213 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 GCATO75600 419 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 F7P08709 466 aaPredicted RBP17.23■□□□□ 0.35
SGCB-201ENST00000381431 IMPDH2P12268 514 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 PFKPQ01813 784 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 NRG1Q02297 640 aaPredicted RBP17.23■□□□□ 0.35
SGCB-201ENST00000381431 ZNF460Q14592 562 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 ACOX1Q15067 660 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 TARBP2Q15633 366 aaKnown RBP17.23■□□□□ 0.35
SGCB-201ENST00000381431 HEATR4Q86WZ0 1026 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 DSELQ8IZU8 1212 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 CMASQ8NFW8 434 aaPredicted RBP17.23■□□□□ 0.35
SGCB-201ENST00000381431 MTERF3Q96E29 417 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 LINGO1Q96FE5 620 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 ZNF317Q96PQ6 595 aaPredicted RBP17.23■□□□□ 0.35
SGCB-201ENST00000381431 CIB1Q99828 191 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 MRPL9Q9BYD2 267 aaKnown RBP17.23■□□□□ 0.35
SGCB-201ENST00000381431 HMX1Q9NP08 348 aaPredicted RBP17.23■□□□□ 0.35
SGCB-201ENST00000381431 AGO1Q9UL18 857 aaKnown RBP17.23■□□□□ 0.35
SGCB-201ENST00000381431 ZNF536O15090 1300 aa17.23■□□□□ 0.35
SGCB-201ENST00000381431 SF3B1O75533 1304 aaKnown RBP eCLIP17.23■□□□□ 0.35
SGCB-201ENST00000381431 TRAFD1O14545 582 aaPredicted RBP17.22■□□□□ 0.35
SGCB-201ENST00000381431 LGR5O75473 907 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 IFNA14P01570 189 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 CCDC159P0C7I6 412 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 NMBRP28336 390 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 MTX3Q5HYI7 312 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 B3GNT6Q6ZMB0 384 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 SAPCD2Q86UD0 394 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 TRAPPC5Q8IUR0 188 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 FAM156AQ8NDB6 213 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 OR4K2Q8NGD2 314 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 ACTRT2Q8TDY3 377 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 S100A14Q9HCY8 104 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 C6orf203Q9P0P8 240 aaPredicted RBP17.22■□□□□ 0.35
SGCB-201ENST00000381431 DUSP12Q9UNI6 340 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 PCDHB12Q9Y5F1 795 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 H3BN98 237 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 MLYCDO95822 493 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 COX7A2P14406 83 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 GSTA3Q16772 222 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 CLEC6AQ6EIG7 209 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 RBM44Q6ZP01 1051 aaKnown RBP17.22■□□□□ 0.35
SGCB-201ENST00000381431 MCRS1Q96EZ8 462 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 EPS8L2Q9H6S3 715 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 CDH22Q9UJ99 828 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 PSMD13Q9UNM6 376 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 MT-ND1P03886 318 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 OR1D2P34982 312 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 HK2P52789 917 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 LSM3P62310 102 aaKnown RBP17.22■□□□□ 0.35
SGCB-201ENST00000381431 FGD3Q5JSP0 725 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 TYW3Q6IPR3 259 aaKnown RBP17.22■□□□□ 0.35
SGCB-201ENST00000381431 TRIM48Q8IWZ4 208 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 NAT8LQ8N9F0 302 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 PHF21AQ96BD5 680 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 C6orf62Q9GZU0 229 aaPredicted RBP17.22■□□□□ 0.35
SGCB-201ENST00000381431 PADI3Q9ULW8 664 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 IPO13O94829 963 aaKnown RBP17.22■□□□□ 0.35
SGCB-201ENST00000381431 RPS7P62081 194 aaKnown RBP17.22■□□□□ 0.35
SGCB-201ENST00000381431 DSC2Q02487 901 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 AFTPHQ6ULP2 937 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 MPP5Q8N3R9 675 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 NOL11Q9H8H0 719 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms