RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 DPY19L2P1Q6NXN4 242 aa16.13■□□□□ 0.17
VCX3A-201ENST00000381089 TRIM72Q6ZMU5 477 aa16.13■□□□□ 0.17
VCX3A-201ENST00000381089 SLFN11Q7Z7L1 901 aa16.13■□□□□ 0.17
VCX3A-201ENST00000381089 CCDC185Q8N715 623 aa16.13■□□□□ 0.17
VCX3A-201ENST00000381089 GPT2Q8TD30 523 aa16.13■□□□□ 0.17
VCX3A-201ENST00000381089 HMCESQ96FZ2 354 aa16.13■□□□□ 0.17
VCX3A-201ENST00000381089 CMKLR1Q99788 373 aa16.13■□□□□ 0.17
VCX3A-201ENST00000381089 C11orf70Q9BRQ4 267 aa16.13■□□□□ 0.17
VCX3A-201ENST00000381089 CATSPERBQ9H7T0 1116 aa16.13■□□□□ 0.17
VCX3A-201ENST00000381089 AKAP7Q9P0M2 348 aaPredicted RBP16.13■□□□□ 0.17
VCX3A-201ENST00000381089 RABGEF1Q9UJ41 708 aa16.13■□□□□ 0.17
VCX3A-201ENST00000381089 NEU3Q9UQ49 428 aa16.13■□□□□ 0.17
VCX3A-201ENST00000381089 COQ6Q9Y2Z9 468 aa16.13■□□□□ 0.17
VCX3A-201ENST00000381089 DAAM1Q9Y4D1 1078 aa16.13■□□□□ 0.17
VCX3A-201ENST00000381089 SPTA1P02549 2419 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 A0A1W2PQM1 296 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 ANKRD62A6NC57 917 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 CACNB4O00305 520 aaPredicted RBP16.12■□□□□ 0.17
VCX3A-201ENST00000381089 CASC3O15234 703 aaKnown RBP16.12■□□□□ 0.17
VCX3A-201ENST00000381089 EFSO43281 561 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 PCCBP05166 539 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 KRT3P12035 628 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 HGFP14210 728 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 PNLIPP16233 465 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 GLB1P16278 677 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 DESP17661 470 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 ITIH2P19823 946 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 KELP23276 732 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 HDAC4P56524 1084 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 ARHGEF7Q14155 803 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 RAB6CQ53S08 254 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 BRAT1Q6PJG6 821 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 TAF8Q7Z7C8 310 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 CENPIQ92674 756 aaPredicted RBP16.12■□□□□ 0.17
VCX3A-201ENST00000381089 VOPP1Q96AW1 172 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 ZNF641Q96N77 438 aaPredicted RBP16.12■□□□□ 0.17
VCX3A-201ENST00000381089 RBM15Q96T37 977 aaKnown RBP eCLIP16.12■□□□□ 0.17
VCX3A-201ENST00000381089 SELENOOQ9BVL4 669 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 RAB6CQ9H0N0 254 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 SUV39H2Q9H5I1 410 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 PCDH12Q9NPG4 1184 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 UBA2Q9UBT2 640 aaPredicted RBP16.12■□□□□ 0.17
VCX3A-201ENST00000381089 APPL1Q9UKG1 709 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 OR1A2Q9Y585 309 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 DGKBQ9Y6T7 804 aa16.12■□□□□ 0.17
VCX3A-201ENST00000381089 RASA4BC9J798 803 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 ZW10O43264 779 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 RASA4O43374 803 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 GFPT2O94808 682 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 PIGNO95427 931 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 CYP1A1P04798 512 aaPredicted RBP16.11■□□□□ 0.17
VCX3A-201ENST00000381089 GPD1P21695 349 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 CD82P27701 267 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 ERCC5P28715 1186 aaPredicted RBP16.11■□□□□ 0.17
VCX3A-201ENST00000381089 NSFP46459 744 aaKnown RBP16.11■□□□□ 0.17
VCX3A-201ENST00000381089 LIG3P49916 1009 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 SERINC3Q13530 473 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 AGERQ15109 404 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 TGIF1Q15583 401 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 HSP90AA4PQ58FG1 418 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 CERCAMQ5T4B2 595 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 TMEM164Q5U3C3 297 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 ATG14Q6ZNE5 492 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 PHLDB2Q86SQ0 1253 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 PAF1Q8N7H5 531 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 Q8N9G6 341 aaPredicted RBP16.11■□□□□ 0.17
VCX3A-201ENST00000381089 EXD3Q8N9H8 876 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 FAM46DQ8NEK8 389 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 GPR156Q8NFN8 814 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 JOSD2Q8TAC2 188 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 SLC20A1Q8WUM9 679 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 EXTL1Q92935 676 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 EXOC2Q96KP1 924 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 TUBGCP5Q96RT8 1024 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 IL17BQ9UHF5 180 aa16.11■□□□□ 0.17
VCX3A-201ENST00000381089 NOCTQ9UK39 431 aaKnown RBP16.11■□□□□ 0.17
VCX3A-201ENST00000381089 UNC13CQ8NB66 2214 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 TSPAN11A1L157 253 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 CFAP69A5D8W1 941 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 INSIG1O15503 277 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 FGF10O15520 208 aaPredicted RBP16.1■□□□□ 0.17
VCX3A-201ENST00000381089 CREB3O43889 395 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 NOBOXO60393 691 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 CALB1P05937 261 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 TPM2P07951 284 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 KRT10P13645 584 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 AIF1P55008 147 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 KIAA1024LP59773 190 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 SYCP1Q15431 976 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 LINC00303Q3SY05 128 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 SCYL2Q6P3W7 929 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 OR56A4Q8NGH8 313 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 SLC30A5Q8TAD4 765 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 PDXPQ96GD0 296 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 NOL6Q9H6R4 1146 aaKnown RBP16.1■□□□□ 0.17
VCX3A-201ENST00000381089 ADAM22Q9P0K1 906 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 LHX3Q9UBR4 397 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 ATP8A1Q9Y2Q0 1164 aa16.1■□□□□ 0.17
VCX3A-201ENST00000381089 A0A1W2PQC6 194 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 WASH4PA8MWX3 477 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms