RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 IGHV5-10-1A0A0J9YXX1 117 aa17.48■□□□□ 0.39
HMGN1-203ENST00000380748 HGSO14964 777 aaPredicted RBP17.48■□□□□ 0.39
HMGN1-203ENST00000380748 PCCBP05166 539 aa17.48■□□□□ 0.39
HMGN1-203ENST00000380748 USP8P40818 1118 aa17.48■□□□□ 0.39
HMGN1-203ENST00000380748 MAZP56270 477 aaKnown RBP17.48■□□□□ 0.39
HMGN1-203ENST00000380748 TMEM52BQ4KMG9 183 aa17.48■□□□□ 0.39
HMGN1-203ENST00000380748 FOXR2Q6PJQ5 311 aa17.48■□□□□ 0.39
HMGN1-203ENST00000380748 ATCAYQ86WG3 371 aa17.48■□□□□ 0.39
HMGN1-203ENST00000380748 ATL2Q8NHH9 583 aa17.48■□□□□ 0.39
HMGN1-203ENST00000380748 CCL4L1Q8NHW4 92 aa17.48■□□□□ 0.39
HMGN1-203ENST00000380748 ART4Q93070 314 aa17.48■□□□□ 0.39
HMGN1-203ENST00000380748 CCDC74BQ96LY2 380 aa17.48■□□□□ 0.39
HMGN1-203ENST00000380748 TMEM168Q9H0V1 697 aa17.48■□□□□ 0.39
HMGN1-203ENST00000380748 DPEP2Q9H4A9 486 aa17.48■□□□□ 0.39
HMGN1-203ENST00000380748 SYNCQ9H7C4 482 aa17.48■□□□□ 0.39
HMGN1-203ENST00000380748 FGF22Q9HCT0 170 aa17.48■□□□□ 0.39
HMGN1-203ENST00000380748 MRPL40Q9NQ50 206 aaKnown RBP17.48■□□□□ 0.39
HMGN1-203ENST00000380748 STAP1Q9ULZ2 295 aa17.48■□□□□ 0.39
HMGN1-203ENST00000380748 CACNA1DQ01668 2161 aa17.47■□□□□ 0.39
HMGN1-203ENST00000380748 TMEM202A6NGA9 273 aa17.47■□□□□ 0.39
HMGN1-203ENST00000380748 RAD1O60671 282 aa17.47■□□□□ 0.39
HMGN1-203ENST00000380748 F9P00740 461 aa17.47■□□□□ 0.39
HMGN1-203ENST00000380748 UQCRFS1P47985 274 aa17.47■□□□□ 0.39
HMGN1-203ENST00000380748 LACTB2Q53H82 288 aaPredicted RBP17.47■□□□□ 0.39
HMGN1-203ENST00000380748 IRF2BP1Q8IU81 584 aa17.47■□□□□ 0.39
HMGN1-203ENST00000380748 NETO2Q8NC67 525 aa17.47■□□□□ 0.39
HMGN1-203ENST00000380748 PLA2G15Q8NCC3 412 aa17.47■□□□□ 0.39
HMGN1-203ENST00000380748 SLC45A3Q96JT2 553 aa17.47■□□□□ 0.39
HMGN1-203ENST00000380748 PCDHGC3Q9UN70 934 aa17.47■□□□□ 0.39
HMGN1-203ENST00000380748 CXorf51AA0A1B0GTR3 108 aa17.46■□□□□ 0.39
HMGN1-203ENST00000380748 PRR19A6NJB7 356 aa17.46■□□□□ 0.39
HMGN1-203ENST00000380748 KRT7P08729 469 aa17.46■□□□□ 0.39
HMGN1-203ENST00000380748 NR1D1P20393 614 aa17.46■□□□□ 0.39
HMGN1-203ENST00000380748 ALDH4A1P30038 563 aa17.46■□□□□ 0.39
HMGN1-203ENST00000380748 MLLT10P55197 1068 aa17.46■□□□□ 0.39
HMGN1-203ENST00000380748 GEMIN4P57678 1058 aaKnown RBP17.46■□□□□ 0.39
HMGN1-203ENST00000380748 KRT85P78386 507 aa17.46■□□□□ 0.39
HMGN1-203ENST00000380748 CDC20Q12834 499 aa17.46■□□□□ 0.39
HMGN1-203ENST00000380748 ACBD5Q5T8D3 534 aaPredicted RBP17.46■□□□□ 0.39
HMGN1-203ENST00000380748 OR56A4Q8NGH8 313 aa17.46■□□□□ 0.39
HMGN1-203ENST00000380748 GSDMAQ96QA5 445 aa17.46■□□□□ 0.39
HMGN1-203ENST00000380748 HAPLN3Q96S86 360 aa17.46■□□□□ 0.39
HMGN1-203ENST00000380748 PLCB1Q9NQ66 1216 aa17.46■□□□□ 0.39
HMGN1-203ENST00000380748 PPARGC1AQ9UBK2 798 aaKnown RBP17.46■□□□□ 0.39
HMGN1-203ENST00000380748 CELSR2Q9HCU4 2923 aa17.46■□□□□ 0.39
HMGN1-203ENST00000380748 CRYBG3Q68DQ2 2970 aa17.46■□□□□ 0.38
HMGN1-203ENST00000380748 FAM170AA1A519 330 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 PSMA7O14818 248 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 AGFG2O95081 481 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 OAS2P29728 719 aaKnown RBP17.45■□□□□ 0.38
HMGN1-203ENST00000380748 ETFBP38117 255 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 KLRB1Q12918 225 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 MTM1Q13496 603 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 DEFB109BQ30KR1 87 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 SLC25A52Q3SY17 297 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 FAM131BQ86XD5 332 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 TRIM59Q8IWR1 403 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 APOBEC4Q8WW27 367 aaKnown RBP17.45■□□□□ 0.38
HMGN1-203ENST00000380748 FUBP1Q96AE4 644 aaKnown RBP17.45■□□□□ 0.38
HMGN1-203ENST00000380748 GDAP1L1Q96MZ0 367 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 DDA1Q9BW61 102 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 DKK3Q9UBP4 350 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 DNAI1Q9UI46 699 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 TP53TG5Q9Y2B4 290 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 ABCA12Q86UK0 2595 aa17.45■□□□□ 0.38
HMGN1-203ENST00000380748 RHPN2P1A8MT19 583 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 INSIG1O15503 277 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 TMCC1O94876 653 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 CD44P16070 742 aaKnown RBP17.44■□□□□ 0.38
HMGN1-203ENST00000380748 XPAP23025 273 aaPredicted RBP17.44■□□□□ 0.38
HMGN1-203ENST00000380748 FLT3P36888 993 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 KIAA1024LP59773 190 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 APBA1Q02410 837 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 ELP6Q0PNE2 266 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 ATP1A1-AS1Q5TC04 95 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 TRNP1Q6NT89 227 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 TTI2Q6NXR4 508 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 ENOSF1Q7L5Y1 443 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 ZNF438Q7Z4V0 828 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 NLRP14Q86W24 1093 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 UNC5BQ8IZJ1 945 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 AGBL5Q8NDL9 886 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 HMCESQ96FZ2 354 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 CCDC34Q96HJ3 373 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 TTYH3Q9C0H2 523 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 GPN2Q9H9Y4 310 aaPredicted RBP17.44■□□□□ 0.38
HMGN1-203ENST00000380748 PCDH12Q9NPG4 1184 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 SPATS2LQ9NUQ6 558 aaKnown RBP17.44■□□□□ 0.38
HMGN1-203ENST00000380748 SLC39A1Q9NY26 324 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 HPCAL4Q9UM19 191 aa17.44■□□□□ 0.38
HMGN1-203ENST00000380748 LOC101059948A0A1B0GTJ6 334 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 K7EM74 188 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 CAPN5O15484 640 aaPredicted RBP17.43■□□□□ 0.38
HMGN1-203ENST00000380748 PIGNO95427 931 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 HSP90AA1P07900 732 aaKnown RBP17.43■□□□□ 0.38
HMGN1-203ENST00000380748 MPSTP25325 297 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 CD1CP29017 333 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 LIG3P49916 1009 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 LIMK2P53671 638 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 SNX16P57768 344 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms