RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 SLC39A8Q9C0K1 460 aa17■□□□□ 0.31
SMN2-201ENST00000380741 DHX35Q9H5Z1 703 aaKnown RBP17■□□□□ 0.31
SMN2-201ENST00000380741 THSD1Q9NS62 852 aa17■□□□□ 0.31
SMN2-201ENST00000380741 PARVAQ9NVD7 372 aa17■□□□□ 0.31
SMN2-201ENST00000380741 DONSONQ9NYP3 566 aa17■□□□□ 0.31
SMN2-201ENST00000380741 ARHGAP42A6NI28 874 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 TK2O00142 265 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 TEX33O43247 280 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 C1QL1O75973 258 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 PRKCGP05129 697 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 TNFAIP3P21580 790 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 ANP32AP39687 249 aaKnown RBP16.99■□□□□ 0.31
SMN2-201ENST00000380741 MMP12P39900 470 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 PDX1P52945 283 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 INPP5AQ14642 412 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 NFATC4Q14934 902 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 ELOCQ15369 112 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 ALG11Q2TAA5 492 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 PLEKHA7Q6IQ23 1121 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 ESRP1Q6NXG1 681 aaKnown RBP16.99■□□□□ 0.31
SMN2-201ENST00000380741 BRAT1Q6PJG6 821 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 IGF2-ASQ6U949 168 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 FSTL5Q8N475 847 aaPredicted RBP16.99■□□□□ 0.31
SMN2-201ENST00000380741 AOPEPQ8N6M6 819 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 ARFGAP1Q8N6T3 406 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 TSEN2Q8NCE0 465 aaKnown RBP16.99■□□□□ 0.31
SMN2-201ENST00000380741 PCDH19Q8TAB3 1148 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 KCNE4Q8WWG9 221 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 TUBGCP5Q96RT8 1024 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 SNRNP25Q9BV90 132 aaKnown RBP16.99■□□□□ 0.31
SMN2-201ENST00000380741 PCSK1NQ9UHG2 260 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 PADI4Q9UM07 663 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 DOLKQ9UPQ8 538 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 ATP8A1Q9Y2Q0 1164 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 OR1A2Q9Y585 309 aa16.99■□□□□ 0.31
SMN2-201ENST00000380741 PMS2P1A4D2B8 440 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 TMEM110-MUSTN1A8MSY1 372 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 EIF3CLB5ME19 914 aaKnown RBP16.98■□□□□ 0.31
SMN2-201ENST00000380741 PALMO75781 387 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 PCCBP05166 539 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 HTR1BP28222 390 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 RBMS1P29558 406 aaKnown RBP16.98■□□□□ 0.31
SMN2-201ENST00000380741 AGERQ15109 404 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 ERMARDQ5T6L9 678 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 PPP1R2P3Q6NXS1 205 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 ENPP7Q6UWV6 458 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 RD3Q7Z3Z2 195 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 SRLQ86TD4 932 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 ARHGAP12Q8IWW6 846 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 ARL10Q8N8L6 244 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 KYQ8NBH2 561 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 WDR48Q8TAF3 677 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 PRR11Q96HE9 360 aaPredicted RBP16.98■□□□□ 0.31
SMN2-201ENST00000380741 SLC46A1Q96NT5 459 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 KCTD15Q96SI1 283 aaPredicted RBP16.98■□□□□ 0.31
SMN2-201ENST00000380741 EIF3CQ99613 913 aaKnown RBP16.98■□□□□ 0.31
SMN2-201ENST00000380741 APOOQ9BUR5 198 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 EDEM3Q9BZQ6 932 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 TRIM7Q9C029 511 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 ATP13A3Q9H7F0 1226 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 SYNDIG1Q9H7V2 258 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 CPNE5Q9HCH3 593 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 SIRPGQ9P1W8 387 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 GULP1Q9UBP9 304 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 MYO6Q9UM54 1294 aa16.98■□□□□ 0.31
SMN2-201ENST00000380741 LRRC53A6NM62 1247 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 KLK10O43240 276 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 RASGRP1O95267 797 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 ALPIP09923 528 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 CTSEP14091 401 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 SERPINA4P29622 427 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 CSNK1DP48730 415 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 UCNP55089 124 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 TMPRSS3P57727 454 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 SRP54P61011 504 aaKnown RBP16.97■□□□□ 0.31
SMN2-201ENST00000380741 C19orf57Q0VDD7 668 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 SPIDRQ14159 915 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 PPP6R3Q5H9R7 873 aaPredicted RBP16.97■□□□□ 0.31
SMN2-201ENST00000380741 BROXQ5VW32 411 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 AFMIDQ63HM1 303 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 KCTD16Q68DU8 428 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 FOXR1Q6PIV2 292 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 LVRNQ6Q4G3 990 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 PCSK4Q6UW60 755 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 ARHGAP36Q6ZRI8 547 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 RFX8Q6ZV50 586 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 CYP4V2Q6ZWL3 525 aaPredicted RBP16.97■□□□□ 0.31
SMN2-201ENST00000380741 NPWQ8N729 165 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 PLA2G15Q8NCC3 412 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 LSM14AQ8ND56 463 aaKnown RBP16.97■□□□□ 0.31
SMN2-201ENST00000380741 SCG3Q8WXD2 468 aaKnown RBP16.97■□□□□ 0.31
SMN2-201ENST00000380741 SP110Q9HB58 689 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 KLQ9UEF7 1012 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 RABGEF1Q9UJ41 708 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 PCDHGA8Q9Y5G5 932 aa16.97■□□□□ 0.31
SMN2-201ENST00000380741 TMEM191CA6NGB0 347 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 DFFAO00273 331 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 NTN3O00634 580 aaPredicted RBP16.96■□□□□ 0.31
SMN2-201ENST00000380741 DAPK3O43293 454 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 ERCC2P18074 760 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms