RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 ATPAF2Q8N5M1 289 aa8.78□□□□□ -1
TRIM6-203ENST00000380107 PPHLN1Q8NEY8 458 aaKnown RBP8.78□□□□□ -1
TRIM6-203ENST00000380107 OR52K2Q8NGK3 314 aa8.78□□□□□ -1
TRIM6-203ENST00000380107 KCTD13Q8WZ19 329 aa8.78□□□□□ -1
TRIM6-203ENST00000380107 DPF3Q92784 378 aa8.78□□□□□ -1
TRIM6-203ENST00000380107 NTAN1Q96AB6 310 aa8.78□□□□□ -1
TRIM6-203ENST00000380107 KCNA7Q96RP8 456 aa8.78□□□□□ -1
TRIM6-203ENST00000380107 MRPL57Q9BQC6 102 aaKnown RBP8.78□□□□□ -1
TRIM6-203ENST00000380107 SLC39A8Q9C0K1 460 aa8.78□□□□□ -1
TRIM6-203ENST00000380107 KATNBL1Q9H079 304 aa8.78□□□□□ -1
TRIM6-203ENST00000380107 SPAG4Q9NPE6 437 aa8.78□□□□□ -1
TRIM6-203ENST00000380107 RBM22Q9NW64 420 aaKnown RBP eCLIP8.78□□□□□ -1
TRIM6-203ENST00000380107 BCAP29Q9UHQ4 241 aa8.78□□□□□ -1
TRIM6-203ENST00000380107 TCAF1Q9Y4C2 921 aa8.78□□□□□ -1
TRIM6-203ENST00000380107 PPP2R3BQ9Y5P8 575 aa8.78□□□□□ -1
TRIM6-203ENST00000380107 NYNRINQ9P2P1 1898 aaKnown RBP8.77□□□□□ -1
TRIM6-203ENST00000380107 COL1A2P08123 1366 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 ALDOCP09972 364 aaKnown RBP8.77□□□□□ -1
TRIM6-203ENST00000380107 ATP5F1P24539 256 aaPredicted RBP8.77□□□□□ -1
TRIM6-203ENST00000380107 APLP1P51693 650 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 MAPK10P53779 464 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 EMP3P54852 163 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 ADARP55265 1226 aaKnown RBP8.77□□□□□ -1
TRIM6-203ENST00000380107 FOXA1P55317 472 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 CTBSQ01459 385 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 PRKCQQ04759 706 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 CACNB2Q08289 660 aaPredicted RBP8.77□□□□□ -1
TRIM6-203ENST00000380107 SCAPQ12770 1279 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 GEN1Q17RS7 908 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 KIF19Q2TAC6 998 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 TECRLQ5HYJ1 363 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 SMYD5Q6GMV2 418 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 NEPROQ6NW34 567 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 DUS1LQ6P1R4 473 aaKnown RBP8.77□□□□□ -1
TRIM6-203ENST00000380107 CHST15Q7LFX5 561 aaPredicted RBP8.77□□□□□ -1
TRIM6-203ENST00000380107 PIWIL4Q7Z3Z4 852 aaKnown RBP8.77□□□□□ -1
TRIM6-203ENST00000380107 DPP9Q86TI2 863 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 IFNEQ86WN2 208 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 CARM1Q86X55 608 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 FUNDC1Q8IVP5 155 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 ARHGAP12Q8IWW6 846 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 OFCC1Q8IZS5 231 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 ZNF786Q8N393 782 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 ZNF597Q96LX8 424 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 PIF1Q9H611 641 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 GLOD4Q9HC38 313 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 DUS2Q9NX74 493 aaKnown RBP8.77□□□□□ -1
TRIM6-203ENST00000380107 SUCOQ9UBS9 1254 aaKnown RBP8.77□□□□□ -1
TRIM6-203ENST00000380107 RSL24D1Q9UHA3 163 aaKnown RBP8.77□□□□□ -1
TRIM6-203ENST00000380107 KCTD3Q9Y597 815 aa8.77□□□□□ -1
TRIM6-203ENST00000380107 TANC1Q9C0D5 1861 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 H3BNH8 94 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 NRP2O60462 931 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 MAFKO60675 156 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 IPO13O94829 963 aaKnown RBP8.77□□□□□ -1.01
TRIM6-203ENST00000380107 PENKP01210 267 aaPredicted RBP8.77□□□□□ -1.01
TRIM6-203ENST00000380107 C8BP07358 591 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 SNRPB2P08579 225 aaKnown RBP8.77□□□□□ -1.01
TRIM6-203ENST00000380107 TFPTP0C1Z6 253 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 HSPA1AP0DMV8 641 aaKnown RBP8.77□□□□□ -1.01
TRIM6-203ENST00000380107 HSPA1BP0DMV9 641 aaKnown RBP8.77□□□□□ -1.01
TRIM6-203ENST00000380107 OXTRP30559 389 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 PNPLA4P41247 253 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 CDKN2DP55273 166 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 STX5Q13190 355 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 TFAP2DQ7Z6R9 452 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 ANKRD13AQ8IZ07 590 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 CBR4Q8N4T8 237 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 FIBCD1Q8N539 461 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 C2CD4AQ8NCU7 369 aaPredicted RBP8.77□□□□□ -1.01
TRIM6-203ENST00000380107 OR6P1Q8NGX9 317 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 RMND5BQ96G75 393 aaPredicted RBP8.77□□□□□ -1.01
TRIM6-203ENST00000380107 MRGPRX2Q96LB1 330 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 KLHL5Q96PQ7 755 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 TMEM209Q96SK2 561 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 SLC9A7Q96T83 725 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 GAD1Q99259 594 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 DNAI2Q9GZS0 605 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 MUC3BQ9H195 1237 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 DNAAF2Q9NVR5 837 aaKnown RBP8.77□□□□□ -1.01
TRIM6-203ENST00000380107 MIOSQ9NXC5 875 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 MYRFQ9Y2G1 1151 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 TRAF6Q9Y4K3 522 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 ZNF236Q9UL36 1845 aa8.77□□□□□ -1.01
TRIM6-203ENST00000380107 A0A1B0GTL3 188 aa8.76□□□□□ -1.01
TRIM6-203ENST00000380107 HHLA1C9JL84 531 aa8.76□□□□□ -1.01
TRIM6-203ENST00000380107 NME4O00746 187 aa8.76□□□□□ -1.01
TRIM6-203ENST00000380107 CXCL11O14625 94 aa8.76□□□□□ -1.01
TRIM6-203ENST00000380107 MTSS1O43312 755 aa8.76□□□□□ -1.01
TRIM6-203ENST00000380107 NPHS1O60500 1241 aa8.76□□□□□ -1.01
TRIM6-203ENST00000380107 SRP72O76094 671 aaKnown RBP8.76□□□□□ -1.01
TRIM6-203ENST00000380107 CAPNS1P04632 268 aa8.76□□□□□ -1.01
TRIM6-203ENST00000380107 MTHFD1P11586 935 aaKnown RBP8.76□□□□□ -1.01
TRIM6-203ENST00000380107 HADHAP40939 763 aa8.76□□□□□ -1.01
TRIM6-203ENST00000380107 YAP1P46937 504 aaKnown RBP8.76□□□□□ -1.01
TRIM6-203ENST00000380107 HSPA13P48723 471 aa8.76□□□□□ -1.01
TRIM6-203ENST00000380107 ARSDP51689 593 aa8.76□□□□□ -1.01
TRIM6-203ENST00000380107 BEX3Q00994 111 aa8.76□□□□□ -1.01
TRIM6-203ENST00000380107 FRG1Q14331 258 aaKnown RBP8.76□□□□□ -1.01
TRIM6-203ENST00000380107 SQLEQ14534 574 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms