RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 ZFP90Q8TF47 636 aa7.3□□□□□ -1.24
DDX58-202ENST00000379883 CLIP3Q96DZ5 547 aa7.3□□□□□ -1.24
DDX58-202ENST00000379883 CEP19Q96LK0 163 aa7.3□□□□□ -1.24
DDX58-202ENST00000379883 MMP27Q9H306 513 aa7.3□□□□□ -1.24
DDX58-202ENST00000379883 USE1Q9NZ43 259 aa7.3□□□□□ -1.24
DDX58-202ENST00000379883 SEPT10Q9P0V9 454 aa7.3□□□□□ -1.24
DDX58-202ENST00000379883 AP4E1Q9UPM8 1137 aa7.3□□□□□ -1.24
DDX58-202ENST00000379883 SLC27A5Q9Y2P5 690 aa7.3□□□□□ -1.24
DDX58-202ENST00000379883 MN1Q10571 1320 aaPredicted RBP7.3□□□□□ -1.24
DDX58-202ENST00000379883 NHSL1Q5SYE7 1610 aa7.3□□□□□ -1.24
DDX58-202ENST00000379883 COL24A1Q17RW2 1714 aa7.3□□□□□ -1.24
DDX58-202ENST00000379883 SNX2O60749 519 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 SOAT2O75908 522 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 ATP5F1P24539 256 aaPredicted RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 RPL10P27635 214 aaKnown RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 CASP3P42574 277 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 ACADSBP45954 432 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 HSPA2P54652 639 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 ZNF45Q02386 682 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 GEN1Q17RS7 908 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 FAM98BQ52LJ0 330 aaKnown RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 CYBRD1Q53TN4 286 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 ZNF667Q5HYK9 610 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.29□□□□□ -1.24
DDX58-202ENST00000379883 BTBD8Q5XKL5 378 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 SLC22A9Q8IVM8 553 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 CPNE9Q8IYJ1 553 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 RHOXF1Q8NHV9 184 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 RXFP2Q8WXD0 754 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 ZHX1-C8orf76Q96EF9 292 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 TRIT1Q9H3H1 467 aaKnown RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 CCNB1IP1Q9NPC3 277 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.29□□□□□ -1.24
DDX58-202ENST00000379883 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 PCDHA10Q9Y5I2 948 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 DDX60LQ5H9U9 1706 aaKnown RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 A0A087X1B8 175 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 ZSCAN5BA6NJL1 495 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 TNPO2O14787 897 aaKnown RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 TULP3O75386 442 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 MTRF1O75570 445 aaKnown RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 ENDOD1O94919 500 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 METTL18O95568 372 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 NCAM1P13591 858 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 DNAJB2P25686 324 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 RFC2P35250 354 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 MAGEA12P43365 314 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 SCNN1DP51172 638 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 NRLP54845 237 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 CHRNB3Q05901 458 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 DAG1Q14118 895 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 NFE2Q16621 373 aaPredicted RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 RFX4Q33E94 735 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 TKFCQ3LXA3 575 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 HSDL1Q3SXM5 330 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 LRIT3Q3SXY7 679 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 HHIPL2Q6UWX4 724 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 SCARA5Q6ZMJ2 495 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 R3HCC1LQ7Z5L2 792 aaKnown RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 RAB44Q7Z6P3 723 aaPredicted RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 DSG4Q86SJ6 1040 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 SPARTQ8N0X7 666 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 MIER2Q8N344 545 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 AADATQ8N5Z0 425 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 SMG8Q8ND04 991 aaKnown RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 MUL1Q969V5 352 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 OMA1Q96E52 524 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 MRPL57Q9BQC6 102 aaKnown RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 RUBCNLQ9H714 662 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 SNTG2Q9NY99 539 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 FBXO9Q9UK97 447 aaPredicted RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 GRIP1Q9Y3R0 1128 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 PCDHAC2Q9Y5I4 1007 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 FADS2P1A8MWK0 482 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 UBXN8O00124 270 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 NR5A2O00482 541 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 TOR1BO14657 336 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 PSMD3O43242 534 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 HOXB6P17509 224 aaKnown RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 NPY2RP49146 381 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 CLK3P49761 638 aaKnown RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 ADARB1P78563 741 aaKnown RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 OTUD3Q5T2D3 398 aaPredicted RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 SLC39A4Q6P5W5 647 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 KCNT2Q6UVM3 1135 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 GALNT13Q8IUC8 556 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 GALNT12Q8IXK2 581 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 MICU2Q8IYU8 434 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 OR13J1Q8NGT2 312 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 POP5Q969H6 163 aaKnown RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 NXNL1Q96CM4 212 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 BTN2A3PQ96KV6 586 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 ZNF358Q9NW07 568 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 GGA3Q9NZ52 723 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 RABL2AQ9UBK7 228 aaPredicted RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 UBA2Q9UBT2 640 aaPredicted RBP7.29□□□□□ -1.24
DDX58-202ENST00000379883 NARFQ9UHQ1 456 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 RAPGEFL1Q9UHV5 662 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 BTBD3Q9Y2F9 522 aa7.29□□□□□ -1.24
DDX58-202ENST00000379883 SNTNA6NMZ2 147 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms