RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 RIOK3O14730 519 aaKnown RBP17.14■□□□□ 0.33
RER1-202ENST00000378512 HTRA2O43464 458 aaPredicted RBP17.14■□□□□ 0.33
RER1-202ENST00000378512 TNFSF14O43557 240 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 NDUFA10O95299 355 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 ITIH2P19823 946 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 CCNCP24863 283 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 SERPINA4P29622 427 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 GJC1P36383 396 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 ELP6Q0PNE2 266 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 BNIP3Q12983 259 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 DNAJC3Q13217 504 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 TAZQ16635 292 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 DHRS13Q6UX07 377 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 TMEM139Q8IV31 216 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 SLC22A18ASQ8N1D0 253 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 PLD5Q8N7P1 536 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 HDAC11Q96DB2 347 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 IFT43Q96FT9 208 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 DTLQ9NZJ0 730 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 AMACRQ9UHK6 382 aa17.14■□□□□ 0.33
RER1-202ENST00000378512 TDRD6O60522 2096 aaKnown RBP17.14■□□□□ 0.33
RER1-202ENST00000378512 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.13■□□□□ 0.33
RER1-202ENST00000378512 CFAP69A5D8W1 941 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 POM121BA6NF01 834 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 SOWAHDA6NJG2 315 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 SOCS5O75159 536 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 THEGLP0DJG4 465 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 COMTP21964 271 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 EPHA8P29322 1005 aaPredicted RBP17.13■□□□□ 0.33
RER1-202ENST00000378512 MMP12P39900 470 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 SCNN1BP51168 640 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 GBE1Q04446 702 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 ZNF235Q14590 738 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 IFI16Q16666 785 aaKnown RBP17.13■□□□□ 0.33
RER1-202ENST00000378512 LRRC73Q5JTD7 316 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 MARC1Q5VT66 337 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 DCP2Q8IU60 420 aaKnown RBP17.13■□□□□ 0.33
RER1-202ENST00000378512 RHOT1Q8IXI2 618 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 OR13H1Q8NG92 308 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 MYOCQ99972 504 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 PCDH12Q9NPG4 1184 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 FTSJ1Q9UET6 329 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 SALL4Q9UJQ4 1053 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 REXO2Q9Y3B8 237 aaKnown RBP17.13■□□□□ 0.33
RER1-202ENST00000378512 ALG6Q9Y672 507 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 LRP4O75096 1905 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 ANKRD11Q6UB99 2663 aaPredicted RBP17.13■□□□□ 0.33
RER1-202ENST00000378512 RCCD1A6NED2 376 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 A6NNZ2 444 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 BTNL10A8MVZ5 291 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 NEMP1O14524 444 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 MATN3O15232 486 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 TM7SF2O76062 418 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 MMP13P45452 471 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 ARRB1P49407 418 aaPredicted RBP17.13■□□□□ 0.33
RER1-202ENST00000378512 CLDN2P57739 230 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 PFN3P60673 137 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 BCL2L1Q07817 233 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 SGCGQ13326 291 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 SPA17Q15506 151 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 TIGD7Q6NT04 549 aaPredicted RBP17.13■□□□□ 0.33
RER1-202ENST00000378512 C19orf48Q6RUI8 117 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 RAD9BQ6WBX8 426 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 BBS5Q8N3I7 341 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 EID2Q8N6I1 236 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 TP53I13Q8NBR0 393 aaPredicted RBP17.13■□□□□ 0.33
RER1-202ENST00000378512 NOD2Q9HC29 1040 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 DDX56Q9NY93 547 aaKnown RBP17.13■□□□□ 0.33
RER1-202ENST00000378512 IMPACTQ9P2X3 320 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 TFR2Q9UP52 801 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 ATP8A1Q9Y2Q0 1164 aa17.13■□□□□ 0.33
RER1-202ENST00000378512 FAM208BQ5VWN6 2430 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 A0A1W2PQ67 120 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 LRRD1A4D1F6 860 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 PSTPIP1O43586 416 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 MMP20O60882 483 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 ITGAVP06756 1048 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 MX2P20592 715 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 POLR2LP62875 67 aaKnown RBP17.12■□□□□ 0.33
RER1-202ENST00000378512 RALGDSQ12967 914 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 CAMK2BQ13554 666 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 C11orf63Q6NUN7 778 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 CXorf40AQ8TE69 158 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 CALR3Q96L12 384 aaKnown RBP17.12■□□□□ 0.33
RER1-202ENST00000378512 OLFM3Q96PB7 478 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 CCDC86Q9H6F5 360 aaKnown RBP17.12■□□□□ 0.33
RER1-202ENST00000378512 LUC7LQ9NQ29 371 aaKnown RBP17.12■□□□□ 0.33
RER1-202ENST00000378512 LHX6Q9UPM6 363 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 RAXQ9Y2V3 346 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 PPIL1Q9Y3C6 166 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 HYOU1Q9Y4L1 999 aa17.12■□□□□ 0.33
RER1-202ENST00000378512 SPTY2D1-AS1A0A0U1RR47 76 aa17.11■□□□□ 0.33
RER1-202ENST00000378512 TTC24A2A3L6 582 aaPredicted RBP17.11■□□□□ 0.33
RER1-202ENST00000378512 TOR1BO14657 336 aa17.11■□□□□ 0.33
RER1-202ENST00000378512 ENC1O14682 589 aa17.11■□□□□ 0.33
RER1-202ENST00000378512 FPGTO14772 594 aa17.11■□□□□ 0.33
RER1-202ENST00000378512 PJA2O43164 708 aa17.11■□□□□ 0.33
RER1-202ENST00000378512 FZD6O60353 706 aa17.11■□□□□ 0.33
RER1-202ENST00000378512 SDC3O75056 442 aa17.11■□□□□ 0.33
RER1-202ENST00000378512 MAP3K6O95382 1288 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms