RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 CPLX3Q8WVH0 158 aa19.35■□□□□ 0.69
CBWD3-204ENST00000377349 GDAP1L1Q96MZ0 367 aa19.35■□□□□ 0.69
CBWD3-204ENST00000377349 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.35■□□□□ 0.69
CBWD3-204ENST00000377349 PCDHGA8Q9Y5G5 932 aa19.35■□□□□ 0.69
CBWD3-204ENST00000377349 TLN1Q9Y490 2541 aaKnown RBP19.35■□□□□ 0.69
CBWD3-204ENST00000377349 ZSCAN5CA6NGD5 496 aaPredicted RBP19.34■□□□□ 0.69
CBWD3-204ENST00000377349 CDRT15L2A8MXV6 281 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 GOLGA6L19H0YKK7 550 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 EEF2KO00418 725 aaKnown RBP19.34■□□□□ 0.69
CBWD3-204ENST00000377349 YY2O15391 372 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 INSIG1O15503 277 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 KLK10O43240 276 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 TCEA3O75764 348 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 TM7SF2O76062 418 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 RNF8O76064 485 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 TSHRP16473 764 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 THOP1P52888 689 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 UCNP55089 124 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 CFHR1Q03591 330 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 PTK2BQ14289 1009 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 IRF4Q15306 451 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 INO80DQ53TQ3 878 aaPredicted RBP19.34■□□□□ 0.69
CBWD3-204ENST00000377349 NYAP1Q6ZVC0 841 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 TPCN2Q8NHX9 752 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 TTC9Q92623 222 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 GRAMD1AQ96CP6 724 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 SYT11Q9BT88 431 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 WRAP53Q9BUR4 548 aaKnown RBP19.34■□□□□ 0.69
CBWD3-204ENST00000377349 DPH1Q9BZG8 443 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 TRIM7Q9C029 511 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 SEMA4CQ9C0C4 833 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 DKK3Q9UBP4 350 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 LHX3Q9UBR4 397 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 SPTA1P02549 2419 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 FGF10O15520 208 aaPredicted RBP19.34■□□□□ 0.69
CBWD3-204ENST00000377349 PRPSAP2O60256 369 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 EIF4A3P38919 411 aaKnown RBP19.34■□□□□ 0.69
CBWD3-204ENST00000377349 AIF1P55008 147 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 FANCCQ00597 558 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 RHDQ02161 417 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 RAD51Q06609 339 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 CA9Q16790 459 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 KLHL40Q2TBA0 621 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 PARP15Q460N3 678 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 BROXQ5VW32 411 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 PAF1Q8N7H5 531 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 WBP1Q96G27 269 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 FUCA2Q9BTY2 467 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 UBA2Q9UBT2 640 aaPredicted RBP19.34■□□□□ 0.69
CBWD3-204ENST00000377349 RABGEF1Q9UJ41 708 aa19.34■□□□□ 0.69
CBWD3-204ENST00000377349 ZFC3H1O60293 1989 aaKnown RBP19.33■□□□□ 0.68
CBWD3-204ENST00000377349 DDX3XO00571 662 aaKnown RBP eCLIP19.33■□□□□ 0.68
CBWD3-204ENST00000377349 NTN3O00634 580 aaPredicted RBP19.33■□□□□ 0.68
CBWD3-204ENST00000377349 TOR1BO14657 336 aa19.33■□□□□ 0.68
CBWD3-204ENST00000377349 XPAP23025 273 aaPredicted RBP19.33■□□□□ 0.68
CBWD3-204ENST00000377349 SERINC3Q13530 473 aa19.33■□□□□ 0.68
CBWD3-204ENST00000377349 CYTH1Q15438 398 aa19.33■□□□□ 0.68
CBWD3-204ENST00000377349 TMEM52BQ4KMG9 183 aa19.33■□□□□ 0.68
CBWD3-204ENST00000377349 PLEKHA7Q6IQ23 1121 aa19.33■□□□□ 0.68
CBWD3-204ENST00000377349 CXorf40AQ8TE69 158 aa19.33■□□□□ 0.68
CBWD3-204ENST00000377349 CASKIN2Q8WXE0 1202 aa19.33■□□□□ 0.68
CBWD3-204ENST00000377349 NAT6Q93015 286 aa19.33■□□□□ 0.68
CBWD3-204ENST00000377349 PEBP4Q96S96 227 aa19.33■□□□□ 0.68
CBWD3-204ENST00000377349 CCDC3Q9BQI4 270 aa19.33■□□□□ 0.68
CBWD3-204ENST00000377349 SNRNP25Q9BV90 132 aaKnown RBP19.33■□□□□ 0.68
CBWD3-204ENST00000377349 AIPL1Q9NZN9 384 aa19.33■□□□□ 0.68
CBWD3-204ENST00000377349 COQ6Q9Y2Z9 468 aa19.33■□□□□ 0.68
CBWD3-204ENST00000377349 SCINQ9Y6U3 715 aa19.33■□□□□ 0.68
CBWD3-204ENST00000377349 TSPAN11A1L157 253 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 WASH4PA8MWX3 477 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 DFFAO00273 331 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 PIGNO95427 931 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 UBASH3AP57075 661 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 PPARDQ03181 441 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 NR1I3Q14994 352 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 WSCD2Q2TBF2 565 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 CFAP58Q5T655 872 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 ERMARDQ5T6L9 678 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 FAXCQ5TGI0 409 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 KCTD16Q68DU8 428 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 CLEC14AQ86T13 490 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 ZNF605Q86T29 641 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 KCTD15Q96SI1 283 aaPredicted RBP19.32■□□□□ 0.68
CBWD3-204ENST00000377349 CPEB1Q9BZB8 566 aaKnown RBP19.32■□□□□ 0.68
CBWD3-204ENST00000377349 SLC13A1Q9BZW2 595 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 PDFQ9HBH1 243 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 PADI4Q9UM07 663 aa19.32■□□□□ 0.68
CBWD3-204ENST00000377349 ANXA6P08133 673 aa19.31■□□□□ 0.68
CBWD3-204ENST00000377349 RBMS1P29558 406 aaKnown RBP19.31■□□□□ 0.68
CBWD3-204ENST00000377349 MIPP30301 263 aa19.31■□□□□ 0.68
CBWD3-204ENST00000377349 PRKCIP41743 596 aa19.31■□□□□ 0.68
CBWD3-204ENST00000377349 RPIAP49247 311 aa19.31■□□□□ 0.68
CBWD3-204ENST00000377349 HK3P52790 923 aa19.31■□□□□ 0.68
CBWD3-204ENST00000377349 YBEYP58557 167 aaPredicted RBP19.31■□□□□ 0.68
CBWD3-204ENST00000377349 VAC14Q08AM6 782 aa19.31■□□□□ 0.68
CBWD3-204ENST00000377349 NFKBIBQ15653 356 aa19.31■□□□□ 0.68
CBWD3-204ENST00000377349 ALG11Q2TAA5 492 aa19.31■□□□□ 0.68
CBWD3-204ENST00000377349 ZSWIM9Q86XI8 627 aa19.31■□□□□ 0.68
CBWD3-204ENST00000377349 UMODL1-AS1Q8N2C9 162 aa19.31■□□□□ 0.68
CBWD3-204ENST00000377349 KYQ8NBH2 561 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms