RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 C16orf96A6NNT2 1141 aa21.43■■□□□ 1.02
CBWD3-202ENST00000377342 RNASEH1O60930 286 aaKnown RBP21.43■■□□□ 1.02
CBWD3-202ENST00000377342 PRKCGP05129 697 aa21.43■■□□□ 1.02
CBWD3-202ENST00000377342 FGF1P05230 155 aa21.43■■□□□ 1.02
CBWD3-202ENST00000377342 C5AR1P21730 350 aa21.43■■□□□ 1.02
CBWD3-202ENST00000377342 MAGEA9P43362 315 aa21.43■■□□□ 1.02
CBWD3-202ENST00000377342 PLTPP55058 493 aa21.43■■□□□ 1.02
CBWD3-202ENST00000377342 RPL26P61254 145 aaKnown RBP21.43■■□□□ 1.02
CBWD3-202ENST00000377342 MSLNQ13421 630 aaPredicted RBP21.43■■□□□ 1.02
CBWD3-202ENST00000377342 FAM46CQ5VWP2 391 aa21.43■■□□□ 1.02
CBWD3-202ENST00000377342 LINC00523Q86TU6 105 aa21.43■■□□□ 1.02
CBWD3-202ENST00000377342 HCAR2Q8TDS4 363 aa21.43■■□□□ 1.02
CBWD3-202ENST00000377342 PABPC3Q9H361 631 aaKnown RBP21.43■■□□□ 1.02
CBWD3-202ENST00000377342 POLMQ9NP87 494 aaPredicted RBP21.43■■□□□ 1.02
CBWD3-202ENST00000377342 CD93Q9NPY3 652 aa21.43■■□□□ 1.02
CBWD3-202ENST00000377342 RPL26L1Q9UNX3 145 aaKnown RBP21.43■■□□□ 1.02
CBWD3-202ENST00000377342 ANKRD66B4E2M5 251 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 AVILO75366 819 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 ALPIP09923 528 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 TIMP2P16035 220 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 ABL2P42684 1182 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 CLCN5P51795 746 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 CNTN1Q12860 1018 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 CFAP58Q5T655 872 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 PIP5KL1Q5T9C9 394 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 LRRC8BQ6P9F7 803 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 PPP1R21Q6ZMI0 780 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 IFT20Q8IY31 132 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 AGGF1Q8N302 714 aaeCLIP21.42■■□□□ 1.02
CBWD3-202ENST00000377342 MDGA1Q8NFP4 955 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 TSTD1Q8NFU3 115 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 HMGB4Q8WW32 186 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 FAM131CQ96AQ9 280 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 PPP1R16AQ96I34 528 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 ADGRE3Q9BY15 652 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 EPHX3Q9H6B9 360 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 PPIL1Q9Y3C6 166 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 SPO11Q9Y5K1 396 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 PLXND1Q9Y4D7 1925 aa21.42■■□□□ 1.02
CBWD3-202ENST00000377342 A0A0J9YYE9 177 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 UPK3BL1B0FP48 263 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 UPK3BL2E5RIL1 263 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 SMAPO00193 183 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 NDC80O14777 642 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 TRBC1P01850 177 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 PIRTP0C851 137 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 MYBL2P10244 700 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 CTPS1P17812 591 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 P2RY2P41231 377 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 CDH17Q12864 832 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 CUL1Q13616 776 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 UGP2Q16851 508 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 AGBL4Q5VU57 503 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 ANO7Q6IWH7 933 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 TMEM105Q8N8V8 129 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 IFT81Q8WYA0 676 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 RUBCNQ92622 972 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 RMDN1Q96DB5 314 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 SIPA1Q96FS4 1042 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 MCCC1Q96RQ3 725 aaPredicted RBP21.41■■□□□ 1.02
CBWD3-202ENST00000377342 HDAC8Q9BY41 377 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 PHTF1Q9UMS5 762 aa21.41■■□□□ 1.02
CBWD3-202ENST00000377342 ZNF106Q9H2Y7 1883 aaKnown RBP21.41■■□□□ 1.02
CBWD3-202ENST00000377342 A0A1W2PQ67 120 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 MLNP12872 115 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 ADRB3P13945 408 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 TNFRSF8P28908 595 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 ELF2Q15723 593 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 MSS51Q4VC12 460 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 FNBP1LQ5T0N5 605 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 ERN2Q76MJ5 926 aaKnown RBP21.4■■□□□ 1.02
CBWD3-202ENST00000377342 GSPT2Q8IYD1 628 aaKnown RBP21.4■■□□□ 1.02
CBWD3-202ENST00000377342 ZCCHC9Q8N567 271 aaKnown RBP21.4■■□□□ 1.02
CBWD3-202ENST00000377342 WDR83Q9BRX9 315 aaKnown RBP21.4■■□□□ 1.02
CBWD3-202ENST00000377342 XAB2Q9HCS7 855 aaKnown RBP21.4■■□□□ 1.02
CBWD3-202ENST00000377342 A0A1W2PP55 124 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 CAPN8A6NHC0 703 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 NPIPB15A6NHN6 443 aaPredicted RBP21.4■■□□□ 1.02
CBWD3-202ENST00000377342 K7ESF4 209 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 BANF1O75531 89 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 PAPSS2O95340 614 aaPredicted RBP21.4■■□□□ 1.02
CBWD3-202ENST00000377342 DNTTP04053 509 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 TPH1P17752 444 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 NEK3P51956 506 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 EPHB1P54762 984 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 VSNL1P62760 191 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 SEMG2Q02383 582 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 CAV1Q03135 178 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 ZBTB16Q05516 673 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 KIAA1324Q6UXG2 1013 aaKnown RBP21.4■■□□□ 1.02
CBWD3-202ENST00000377342 MAMSTRQ6ZN01 415 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 RASSF3Q86WH2 238 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 PAF1Q8N7H5 531 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 FAM129AQ9BZQ8 928 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 PCDH12Q9NPG4 1184 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 GGT7Q9UJ14 662 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 NFU1Q9UMS0 254 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 ITM2BQ9Y287 266 aa21.4■■□□□ 1.02
CBWD3-202ENST00000377342 A0A0U1RQS6 177 aa21.39■■□□□ 1.01
CBWD3-202ENST00000377342 CTIFO43310 598 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms