RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 GIPC2Q8TF65 315 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 HBEGFQ99075 208 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 TRMT13Q9NUP7 481 aaKnown RBP13.01□□□□□ -0.33
USP11-204ENST00000377107 GMIPQ9P107 970 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 LZTS1Q9Y250 596 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 GLTPD2A6NH11 291 aa13□□□□□ -0.33
USP11-204ENST00000377107 A8MT66 165 aa13□□□□□ -0.33
USP11-204ENST00000377107 SUPT3HB4E1H0 165 aa13□□□□□ -0.33
USP11-204ENST00000377107 AHCYL1O43865 530 aa13□□□□□ -0.33
USP11-204ENST00000377107 SUPT3HO75486 399 aa13□□□□□ -0.33
USP11-204ENST00000377107 LTA4HP09960 611 aaKnown RBP13□□□□□ -0.33
USP11-204ENST00000377107 ECT2LQ008S8 904 aa13□□□□□ -0.33
USP11-204ENST00000377107 SCAPQ12770 1279 aa13□□□□□ -0.33
USP11-204ENST00000377107 TRIM32Q13049 653 aa13□□□□□ -0.33
USP11-204ENST00000377107 MTX3Q5HYI7 312 aa13□□□□□ -0.33
USP11-204ENST00000377107 KBTBD6Q86V97 674 aa13□□□□□ -0.33
USP11-204ENST00000377107 ZNF280BQ86YH2 543 aa13□□□□□ -0.33
USP11-204ENST00000377107 KDM1BQ8NB78 822 aa13□□□□□ -0.33
USP11-204ENST00000377107 TRPC4APQ8TEL6 797 aa13□□□□□ -0.33
USP11-204ENST00000377107 LPGAT1Q92604 370 aa13□□□□□ -0.33
USP11-204ENST00000377107 SMIM14Q96QK8 99 aa13□□□□□ -0.33
USP11-204ENST00000377107 FCRL5Q96RD9 977 aa13□□□□□ -0.33
USP11-204ENST00000377107 KCNA7Q96RP8 456 aa13□□□□□ -0.33
USP11-204ENST00000377107 C1QTNF1Q9BXJ1 281 aa13□□□□□ -0.33
USP11-204ENST00000377107 SEMA4BQ9NPR2 832 aaPredicted RBP13□□□□□ -0.33
USP11-204ENST00000377107 RRN3Q9NYV6 651 aa13□□□□□ -0.33
USP11-204ENST00000377107 VTI1BQ9UEU0 232 aa13□□□□□ -0.33
USP11-204ENST00000377107 VWA7Q9Y334 891 aa13□□□□□ -0.33
USP11-204ENST00000377107 SDHDO14521 159 aa13□□□□□ -0.33
USP11-204ENST00000377107 TIPRLO75663 272 aa13□□□□□ -0.33
USP11-204ENST00000377107 CRTAMO95727 393 aa13□□□□□ -0.33
USP11-204ENST00000377107 SLC7A2P52569 658 aa13□□□□□ -0.33
USP11-204ENST00000377107 PCBP1Q15365 356 aaKnown RBP eCLIP13□□□□□ -0.33
USP11-204ENST00000377107 POTEHQ6S545 545 aa13□□□□□ -0.33
USP11-204ENST00000377107 PIWIL4Q7Z3Z4 852 aaKnown RBP13□□□□□ -0.33
USP11-204ENST00000377107 PTGR2Q8N8N7 351 aaPredicted RBP13□□□□□ -0.33
USP11-204ENST00000377107 OR13C4Q8NGS5 318 aa13□□□□□ -0.33
USP11-204ENST00000377107 RSPH1Q8WYR4 309 aa13□□□□□ -0.33
USP11-204ENST00000377107 RRAGCQ9HB90 399 aa13□□□□□ -0.33
USP11-204ENST00000377107 ZBTB26Q9HCK0 441 aa13□□□□□ -0.33
USP11-204ENST00000377107 TIMM22Q9Y584 194 aa13□□□□□ -0.33
USP11-204ENST00000377107 HEATR9A2RTY3 570 aa13□□□□□ -0.33
USP11-204ENST00000377107 H3BNX3 289 aa13□□□□□ -0.33
USP11-204ENST00000377107 IPO13O94829 963 aaKnown RBP13□□□□□ -0.33
USP11-204ENST00000377107 LINC00032P0C843 101 aa13□□□□□ -0.33
USP11-204ENST00000377107 AKR1A1P14550 325 aa13□□□□□ -0.33
USP11-204ENST00000377107 CKMT2P17540 419 aa13□□□□□ -0.33
USP11-204ENST00000377107 RGS2P41220 211 aa13□□□□□ -0.33
USP11-204ENST00000377107 GRIA3P42263 894 aa13□□□□□ -0.33
USP11-204ENST00000377107 HCAR3P49019 387 aa13□□□□□ -0.33
USP11-204ENST00000377107 RENBPP51606 427 aa13□□□□□ -0.33
USP11-204ENST00000377107 AIF1P55008 147 aa13□□□□□ -0.33
USP11-204ENST00000377107 TSTD2Q5T7W7 516 aa13□□□□□ -0.33
USP11-204ENST00000377107 DENND5AQ6IQ26 1287 aa13□□□□□ -0.33
USP11-204ENST00000377107 RBM44Q6ZP01 1051 aaKnown RBP13□□□□□ -0.33
USP11-204ENST00000377107 FBXO32Q969P5 355 aa13□□□□□ -0.33
USP11-204ENST00000377107 KLHL32Q96NJ5 620 aa13□□□□□ -0.33
USP11-204ENST00000377107 ACBD6Q9BR61 282 aa13□□□□□ -0.33
USP11-204ENST00000377107 NOL11Q9H8H0 719 aaKnown RBP13□□□□□ -0.33
USP11-204ENST00000377107 EML4Q9HC35 981 aaKnown RBP13□□□□□ -0.33
USP11-204ENST00000377107 GTF2IRD1Q9UHL9 959 aa13□□□□□ -0.33
USP11-204ENST00000377107 TRAF6Q9Y4K3 522 aa13□□□□□ -0.33
USP11-204ENST00000377107 FESP07332 822 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 FMO4P31512 558 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 ACVRL1P37023 503 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 SCNN1BP51168 640 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 PLOD1Q02809 727 aaPredicted RBP12.99□□□□□ -0.33
USP11-204ENST00000377107 SULT2A1Q06520 285 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 PM20D1Q6GTS8 502 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 MPP4Q96JB8 637 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 MTG1Q9BT17 334 aaPredicted RBP12.99□□□□□ -0.33
USP11-204ENST00000377107 OSER1Q9NX31 292 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 UBXN8O00124 270 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 AP3B1O00203 1094 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 RNASEH2AO75792 299 aaKnown RBP12.99□□□□□ -0.33
USP11-204ENST00000377107 CHRM3P20309 590 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 HADHAP40939 763 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 POLD3Q15054 466 aaPredicted RBP12.99□□□□□ -0.33
USP11-204ENST00000377107 VPS26BQ4G0F5 336 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 XKR4Q5GH76 650 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 TIGD7Q6NT04 549 aaPredicted RBP12.99□□□□□ -0.33
USP11-204ENST00000377107 PGAM4Q8N0Y7 254 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 LILRA2Q8N149 483 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 NSUN5Q96P11 429 aaKnown RBP12.99□□□□□ -0.33
USP11-204ENST00000377107 PHF12Q96QT6 1004 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 OSBPL2Q9H1P3 480 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 BPIFA1Q9NP55 256 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 RNF103-CHMP3A0A140T963 221 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 SLCO1B7G3V0H7 640 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 BAIAP3O94812 1187 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 IRF1P10914 325 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 UGT1A6P19224 532 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 KCNC1P48547 511 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 CDKN2DP55273 166 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 USP46P62068 366 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 STX5Q13190 355 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 SCD5Q86SK9 330 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 SETD3Q86TU7 594 aaPredicted RBP12.99□□□□□ -0.33
USP11-204ENST00000377107 GABPB2Q8TAK5 448 aaPredicted RBP12.99□□□□□ -0.33
USP11-204ENST00000377107 SPATA16Q9BXB7 569 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms