RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CA12O43570 354 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 ZNF24P17028 368 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 TACR2P21452 398 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 PKNOX1P55347 436 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 TSNQ15631 228 aaKnown RBP13.69□□□□□ -0.22
GPC6-201ENST00000377047 PARP15Q460N3 678 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 INTS11Q5TA45 600 aaKnown RBP13.69□□□□□ -0.22
GPC6-201ENST00000377047 KLHL35Q6PF15 583 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 REEP1Q9H902 201 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 KLHL3Q9UH77 587 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 MAPRE3Q9UPY8 281 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 TRBV23OR9-2A0A075B6M9 112 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 KLRG2A4D1S0 409 aaPredicted RBP13.68□□□□□ -0.22
GPC6-201ENST00000377047 H3BQF6 201 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 GTPBP1O00178 669 aaKnown RBP13.68□□□□□ -0.22
GPC6-201ENST00000377047 PTPN2P17706 415 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 ALKBH2Q6NS38 261 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 LINGO4Q6UY18 593 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 C2orf73Q8N5S3 287 aaPredicted RBP13.68□□□□□ -0.22
GPC6-201ENST00000377047 OR6Y1Q8NGX8 325 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 P2RY11Q96G91 374 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 TTLL2Q9BWV7 592 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 TNKS2Q9H2K2 1166 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 COG5Q9UP83 839 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 ZNF780BQ9Y6R6 833 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 SLC25A12O75746 678 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 RASGRP1O95267 797 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 OTCP00480 354 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 NR2F1P10589 423 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 MBTD1Q05BQ5 628 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 UBE2R2Q712K3 238 aaPredicted RBP13.68□□□□□ -0.22
GPC6-201ENST00000377047 STRADAQ7RTN6 431 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 OR8H2Q8N162 312 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 PPP3R2Q96LZ3 170 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 MRPL57Q9BQC6 102 aaKnown RBP13.68□□□□□ -0.22
GPC6-201ENST00000377047 SERHL2Q9H4I8 314 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 SERHLQ9NQF3 203 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 MAFBQ9Y5Q3 323 aaPredicted RBP13.68□□□□□ -0.22
GPC6-201ENST00000377047 CLUHO75153 1309 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 AVILO75366 819 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 CCNDBP1O95273 360 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 FGRP09769 529 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 XYLT1Q86Y38 959 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 NELL1Q92832 810 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 MYLK2Q9H1R3 596 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 PDP2Q9P2J9 529 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 ZFP37Q9Y6Q3 630 aaPredicted RBP13.68□□□□□ -0.22
GPC6-201ENST00000377047 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.68□□□□□ -0.22
GPC6-201ENST00000377047 CILPO75339 1184 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 RPL17P18621 184 aaKnown RBP13.68□□□□□ -0.22
GPC6-201ENST00000377047 PIK3R1P27986 724 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 ARL2P36404 184 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 CORO7P57737 925 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 CPSF6Q16630 551 aaKnown RBP eCLIP13.68□□□□□ -0.22
GPC6-201ENST00000377047 LCLAT1Q6UWP7 414 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 SH3BP5LQ7L8J4 393 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 ANKS1BQ7Z6G8 1248 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 ZNF276Q8N554 614 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 MTMR14Q8NCE2 650 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 GDPD5Q8WTR4 605 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 ZMAT2Q96NC0 199 aaKnown RBP13.68□□□□□ -0.22
GPC6-201ENST00000377047 EBNA1BP2Q99848 306 aaKnown RBP13.68□□□□□ -0.22
GPC6-201ENST00000377047 COL20A1Q9P218 1284 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 PCYOX1Q9UHG3 505 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 KCNE2Q9Y6J6 123 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 MED1Q15648 1581 aaPredicted RBP13.68□□□□□ -0.22
GPC6-201ENST00000377047 LRRC10BA6NIK2 292 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 WNT7AO00755 349 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 MYL12BO14950 172 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 SYN3O14994 580 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 HGFP14210 728 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 PRMT2P55345 433 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 INAQ16352 499 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 BHLHB9Q6PI77 547 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 SCLYQ96I15 445 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 VPS4AQ9UN37 437 aa13.68□□□□□ -0.22
GPC6-201ENST00000377047 SNHG28P0DPA3 235 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 RANBP1P43487 201 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 CXCR3P49682 368 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 RHBDF2Q6PJF5 856 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 PRSS55Q6UWB4 352 aaPredicted RBP13.67□□□□□ -0.22
GPC6-201ENST00000377047 ZNF605Q86T29 641 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 BAP1Q92560 729 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 SLITRK2Q9H156 845 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 SEMA6AQ9H2E6 1030 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 EPB41L4BQ9H329 900 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 GLOD4Q9HC38 313 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 GLYATL1P3A0A0U1RQE8 302 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.67□□□□□ -0.22
GPC6-201ENST00000377047 CYP3A5P20815 502 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 ICAM3P32942 547 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 PTPN20Q4JDL3 420 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 TXNDC11Q6PKC3 985 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 IFNL1Q8IU54 200 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 AENQ8WTP8 325 aaKnown RBP13.67□□□□□ -0.22
GPC6-201ENST00000377047 CPXM1Q96SM3 734 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 S100A13Q99584 98 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 HDHD2Q9H0R4 259 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 SLIT3O75094 1523 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 ROBO3Q96MS0 1386 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms