RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 RBP1P09455 135 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 RPL5P46777 297 aaKnown RBP25.45■■□□□ 1.66
C9orf40-201ENST00000376854 HUNKP57058 714 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 CDKL1Q00532 357 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 TRIM25Q14258 630 aaKnown RBP25.45■■□□□ 1.66
C9orf40-201ENST00000376854 GK3PQ14409 553 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 AGKQ53H12 422 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 ATP6V1E2Q96A05 226 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 TSPAN17Q96FV3 270 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 UNC93B1Q9H1C4 597 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 SLC25A51Q9H1U9 297 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 AGO3Q9H9G7 860 aaKnown RBP25.45■■□□□ 1.66
C9orf40-201ENST00000376854 CCDC167Q9P0B6 97 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 APPL1Q9UKG1 709 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.45■■□□□ 1.66
C9orf40-201ENST00000376854 RGS2P41220 211 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 PSMD8P48556 350 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 LSAMPQ13449 338 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 LRP8Q14114 963 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 GNASQ5JWF2 1037 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 IL23RQ5VWK5 629 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 REP15Q6BDI9 236 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 PNPLA1Q8N8W4 532 aa25.45■■□□□ 1.66
C9orf40-201ENST00000376854 GABPB2Q8TAK5 448 aaPredicted RBP25.45■■□□□ 1.66
C9orf40-201ENST00000376854 FBP2O00757 339 aa25.44■■□□□ 1.66
C9orf40-201ENST00000376854 GPC4O75487 556 aa25.44■■□□□ 1.66
C9orf40-201ENST00000376854 RTN3O95197 1032 aaPredicted RBP25.44■■□□□ 1.66
C9orf40-201ENST00000376854 TNFAIP8O95379 198 aa25.44■■□□□ 1.66
C9orf40-201ENST00000376854 SERPINH1P50454 418 aaKnown RBP25.44■■□□□ 1.66
C9orf40-201ENST00000376854 SCD5Q86SK9 330 aa25.44■■□□□ 1.66
C9orf40-201ENST00000376854 LRRC49Q8IUZ0 686 aa25.44■■□□□ 1.66
C9orf40-201ENST00000376854 AHI1Q8N157 1196 aa25.44■■□□□ 1.66
C9orf40-201ENST00000376854 PCDHAC1Q9H158 963 aa25.44■■□□□ 1.66
C9orf40-201ENST00000376854 ARNT2Q9HBZ2 717 aa25.44■■□□□ 1.66
C9orf40-201ENST00000376854 IGHA2P01877 340 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 TFAP2AP05549 437 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 HDCP19113 662 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 GRIK1P39086 918 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 MYBPC1Q00872 1141 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 ACAP2Q15057 778 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 HECTD2Q5U5R9 776 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 OVOS1Q6IE37 1185 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 ANKRD49Q8WVL7 239 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 DGCR14Q96DF8 476 aaKnown RBP25.43■■□□□ 1.66
C9orf40-201ENST00000376854 DSEQ9UL01 958 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 INHBEP58166 350 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 MAPRE1Q15691 268 aaKnown RBP25.43■■□□□ 1.66
C9orf40-201ENST00000376854 PAOXQ6QHF9 649 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 C17orf99Q6UX52 265 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 CD300LGQ6UXG3 332 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 PTAR1Q7Z6K3 402 aaPredicted RBP25.43■■□□□ 1.66
C9orf40-201ENST00000376854 UBXN10Q96LJ8 280 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 SENP6Q9GZR1 1112 aaPredicted RBP25.43■■□□□ 1.66
C9orf40-201ENST00000376854 ZNF696Q9H7X3 374 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 NT5MQ9NPB1 228 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 AP4S1Q9Y587 144 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 TRPM7Q96QT4 1865 aa25.43■■□□□ 1.66
C9orf40-201ENST00000376854 CTGFP29279 349 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 TSPY1Q01534 308 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 ITKQ08881 620 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 MRPL10Q7Z7H8 261 aaKnown RBP25.42■■□□□ 1.66
C9orf40-201ENST00000376854 SLC22A9Q8IVM8 553 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 OR13J1Q8NGT2 312 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 EME1Q96AY2 570 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 NMD3Q96D46 503 aaKnown RBP25.42■■□□□ 1.66
C9orf40-201ENST00000376854 IMP4Q96G21 291 aaKnown RBP25.42■■□□□ 1.66
C9orf40-201ENST00000376854 MRPS26Q9BYN8 205 aaKnown RBP25.42■■□□□ 1.66
C9orf40-201ENST00000376854 NMUR1Q9HB89 426 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 RRAGCQ9HB90 399 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 SARDHQ9UL12 918 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 PEX11BO96011 259 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 C8BP07358 591 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 AKR1A1P14550 325 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 CD86P42081 329 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 INHBCP55103 352 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 MAXP61244 160 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 SLC14A2Q15849 920 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 SLC5A9Q2M3M2 681 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 IYDQ6PHW0 289 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 CILP2Q8IUL8 1156 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 SPATA2LQ8IUW3 424 aaPredicted RBP25.42■■□□□ 1.66
C9orf40-201ENST00000376854 THEM5Q8N1Q8 247 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 RANBP9Q96S59 729 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 NOL6Q9H6R4 1146 aaKnown RBP25.42■■□□□ 1.66
C9orf40-201ENST00000376854 ATP13A1Q9HD20 1204 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 PLK2Q9NYY3 685 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 CNOT11Q9UKZ1 510 aaKnown RBP25.42■■□□□ 1.66
C9orf40-201ENST00000376854 VWA7Q9Y334 891 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 TRAF6Q9Y4K3 522 aa25.42■■□□□ 1.66
C9orf40-201ENST00000376854 NYNRINQ9P2P1 1898 aaKnown RBP25.41■■□□□ 1.66
C9orf40-201ENST00000376854 M0QZQ0 153 aa25.41■■□□□ 1.66
C9orf40-201ENST00000376854 TNFRSF10BO14763 440 aa25.41■■□□□ 1.66
C9orf40-201ENST00000376854 TRIM24O15164 1050 aa25.41■■□□□ 1.66
C9orf40-201ENST00000376854 SNRPB2P08579 225 aaKnown RBP25.41■■□□□ 1.66
C9orf40-201ENST00000376854 FAM58BPP0C7Q3 252 aa25.41■■□□□ 1.66
C9orf40-201ENST00000376854 SH3BGRP55822 239 aaPredicted RBP25.41■■□□□ 1.66
C9orf40-201ENST00000376854 GALNT1Q10472 559 aaPredicted RBP25.41■■□□□ 1.66
C9orf40-201ENST00000376854 RALGDSQ12967 914 aa25.41■■□□□ 1.66
C9orf40-201ENST00000376854 RSPH1Q8WYR4 309 aa25.41■■□□□ 1.66
C9orf40-201ENST00000376854 TOP1MTQ969P6 601 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms