RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 PNPLA1Q8N8W4 532 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 LPGAT1Q92604 370 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 TSPAN17Q96FV3 270 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 ZFRQ96KR1 1074 aaKnown RBP14.64□□□□□ -0.07
MSH5-201ENST00000375703 SEMA6AQ9H2E6 1030 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 ZNF696Q9H7X3 374 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 PLK2Q9NYY3 685 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 CNOT11Q9UKZ1 510 aaKnown RBP14.64□□□□□ -0.07
MSH5-201ENST00000375703 TLL2Q9Y6L7 1015 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 E9PAM4 449 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 VILLO15195 856 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 POMCP01189 267 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 SNRPB2P08579 225 aaKnown RBP14.64□□□□□ -0.07
MSH5-201ENST00000375703 PGFP49763 221 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 CLCN2P51788 898 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 NADK2Q4G0N4 442 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 HECTD2Q5U5R9 776 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 PTAR1Q7Z6K3 402 aaPredicted RBP14.64□□□□□ -0.07
MSH5-201ENST00000375703 LRRC49Q8IUZ0 686 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 SLC22A9Q8IVM8 553 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 RTL3Q8N8U3 475 aaKnown RBP14.64□□□□□ -0.07
MSH5-201ENST00000375703 HASPINQ8TF76 798 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 PTPN18Q99952 460 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 SLC25A51Q9H1U9 297 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 ARNT2Q9HBZ2 717 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 ETAA1Q9NY74 926 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 VWA7Q9Y334 891 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 TRAF6Q9Y4K3 522 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 TRPV2Q9Y5S1 764 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 AK5Q9Y6K8 562 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 CCDC160A6NGH7 325 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 CTSHP09668 335 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 ZNF26P17031 533 aaPredicted RBP14.63□□□□□ -0.07
MSH5-201ENST00000375703 HOXC8P31273 242 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 SERPINH1P50454 418 aaKnown RBP14.63□□□□□ -0.07
MSH5-201ENST00000375703 RHDQ02161 417 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 NRF1Q16656 503 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 FSCN1Q16658 493 aaKnown RBP14.63□□□□□ -0.07
MSH5-201ENST00000375703 MORN1Q5T089 497 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 ARTNQ5T4W7 220 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 ARMC3Q5W041 872 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 AFMIDQ63HM1 303 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 KDELC1Q6UW63 502 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 METTL25Q8N6Q8 603 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 ANKRD49Q8WVL7 239 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 MPP4Q96JB8 637 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 UBXN10Q96LJ8 280 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 CPA4Q9UI42 421 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 SARDHQ9UL12 918 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 HS3ST4Q9Y661 456 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 ANKRD33BA6NCL7 494 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 TRPA1O75762 1119 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 C8BP07358 591 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 GRIK1P39086 918 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 PURAQ00577 322 aaKnown RBP14.63□□□□□ -0.07
MSH5-201ENST00000375703 GALNT1Q10472 559 aaPredicted RBP14.63□□□□□ -0.07
MSH5-201ENST00000375703 TRAP1Q12931 704 aaKnown RBP14.63□□□□□ -0.07
MSH5-201ENST00000375703 CCL14Q16627 93 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 OR10T2Q8NGX3 314 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 LRTOMTQ8WZ04 291 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 TOP1MTQ969P6 601 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 GRIP2Q9C0E4 1043 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 SMOC2Q9H3U7 446 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 COQ10BQ9H8M1 238 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 NT5MQ9NPB1 228 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 SPAG4Q9NPE6 437 aa14.63□□□□□ -0.07
MSH5-201ENST00000375703 MYOCOSA0A1B0GUC4 107 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 PRORSD1PA6NEY8 169 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 TRIM24O15164 1050 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 IMPDH1P20839 514 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 RENBPP51606 427 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 SLC5A3P53794 718 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 RALGDSQ12967 914 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 IRF5Q13568 498 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 LAYNQ6UX15 382 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 SNX31Q8N9S9 440 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 OR6P1Q8NGX9 317 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 PKMYT1Q99640 499 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 BPTFQ12830 3046 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 MRASO14807 208 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 NRP2O60462 931 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 SUPT7LO94864 414 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 CSPG5O95196 566 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 CYP11A1P05108 521 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 PSMC3P17980 439 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 TSPAN8P19075 237 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 MLLT6P55198 1093 aaPredicted RBP14.62□□□□□ -0.07
MSH5-201ENST00000375703 MAXP61244 160 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 SLC14A2Q15849 920 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 CLEC6AQ6EIG7 209 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 OVOS1Q6IE37 1185 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 KLHDC10Q6PID8 442 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 SCD5Q86SK9 330 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 LDB1Q86U70 411 aaPredicted RBP14.62□□□□□ -0.07
MSH5-201ENST00000375703 CILP2Q8IUL8 1156 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 THEM5Q8N1Q8 247 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 DDI1Q8WTU0 396 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 SLC25A23Q9BV35 468 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 GSTO2Q9H4Y5 243 aa14.62□□□□□ -0.07
MSH5-201ENST00000375703 ALG9Q9H6U8 611 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms